PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sevir.9G425100.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family | bZIP | ||||||||
Protein Properties | Length: 246aa MW: 25785.7 Da PI: 10.1028 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 46 | 1.2e-14 | 173 | 214 | 5 | 46 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 +r +r++kNRe+A rsR+RK+a++ eLe+k+ +Le+eN++L+ Sevir.9G425100.2.p 173 RRKKRMIKNRESAARSRARKQAYTNELENKISQLEEENERLR 214 799*************************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.5E-9 | 169 | 235 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.656 | 171 | 214 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.38E-11 | 173 | 215 | No hit | No description |
CDD | cd14707 | 1.10E-20 | 173 | 214 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.0E-14 | 173 | 214 | No hit | No description |
Pfam | PF00170 | 3.9E-12 | 173 | 214 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 176 | 191 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence Send to blast |
MGAKAMSSHG SGAAGGGGGG AALSRQGSVC SLTFGEADGQ LHGVNLDDLL RAGRKTVDEV 60 WRDIQGAGGG ACPRAQMTLE DFLSRAGTSA PADAAGNGAC ARSWGAHQLY QPAPAPQLGR 120 HHQPAVGRPV PRPLGVGAGP VLEALYYEGG AAAAAGGNRA GPEHGVAERS NERRKKRMIK 180 NRESAARSRA RKQAYTNELE NKISQLEEEN ERLRGHKAPE PVVQYVPQQE VKNQLQLRRT 240 NSANF* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Sevir.9G425100.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022678911.1 | 1e-151 | ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X2 | ||||
TrEMBL | A0A368SRG8 | 1e-150 | A0A368SRG8_SETIT; Uncharacterized protein | ||||
STRING | Sb01g036810.1 | 1e-114 | (Sorghum bicolor) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56850.1 | 3e-26 | ABA-responsive element binding protein 3 |
Link Out ? help Back to Top | |
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Phytozome | Sevir.9G425100.2.p |