PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sevir.9G261100.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family | ERF | ||||||||
Protein Properties | Length: 255aa MW: 28353.1 Da PI: 7.0255 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 25.7 | 2.8e-08 | 19 | 65 | 2 | 53 |
AP2 2 gykGVrwdkkrgrWvAeIrdpse.ngkrkrfslgkfgtaeeAakaaiaarkkl 53 +y+GV + +g+W A+I + +g + f++g+f ta Aa a+++a ++ Sevir.9G261100.1.p 19 QYRGVAMLP-DGKWHAYIV---NrDG--RPFNVGRFETATAAALAHDRAILAV 65 69*******.9******54...4343..*******************998765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 1.1E-10 | 19 | 78 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 1.58E-11 | 19 | 80 | No hit | No description |
PROSITE profile | PS51032 | 12.167 | 19 | 78 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 5.43E-10 | 19 | 77 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 4.3E-5 | 19 | 84 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 2.8E-4 | 20 | 64 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence Send to blast |
MATTEVPVAL TPTPATAVQY RGVAMLPDGK WHAYIVNRDG RPFNVGRFET ATAAALAHDR 60 AILAVLGADT SAAVLNFRAA FSDTELRFLR GRHAPMRPTG VVAMVQKSCD GSYDAELSRF 120 AAHAFDAYMD PELALDVANF RLRHSDMLHR LKEKASITAG TNASQETCAK AKLDAEREAF 180 VQAAKNKATD ELWVKQYHQR RQQTGRTFED ENRWPLVLPD VNVHVDWFPG EELIYLPHGS 240 SYVDEMILRK DVPK* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Sevir.9G261100.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | K4AKM2 | 0.0 | K4AKM2_SETIT; Uncharacterized protein | ||||
STRING | Si039445m | 0.0 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP15058 | 17 | 18 |
Link Out ? help Back to Top | |
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Phytozome | Sevir.9G261100.1.p |