PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sevir.9G167900.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family | NAC | ||||||||
Protein Properties | Length: 212aa MW: 22085 Da PI: 9.5613 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 27.8 | 7e-09 | 9 | 145 | 8 | 126 |
NAM 8 hPtdeelvveyLkkkvegkk...leleevikevdiykvePwdLpk.kvka.eekew..yfFskrdkkyatgkrknratksgyWkatgkdke 91 hP+d++l+ + L++ + + + + +i+ +d+y+v P++L + + a ++ w yf ++++ ++ + a +g W ++ ++ Sevir.9G167900.1.p 9 HPNDHDLIAFVLRPMAVAGHhhgFVGGGIIHLADVYSVAPERLAErYAPApGTGGWiwYFLCPARCRH--RAAAAGALGQGCWASSSETGG 97 8************99666662333333479999**********8422223333355327777765544..456666889*****9999888 PP NAM 92 vlsk.....kgelvglkktLvfy........kgrapkgektdWvmhey 126 v ++ +g+ vg + L + a ++ W+m e Sevir.9G167900.1.p 98 VAARpvrgpGGRRVGQSRALSYSsygartaaAPWAAAVTRHGWCMVEL 145 8888787779999********984444322111223334666777665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 18.624 | 2 | 169 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 8.11E-17 | 8 | 169 | IPR003441 | NAC domain |
Pfam | PF02365 | 8.7E-8 | 9 | 146 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence Send to blast |
MAAAAAADHP NDHDLIAFVL RPMAVAGHHH GFVGGGIIHL ADVYSVAPER LAERYAPAPG 60 TGGWIWYFLC PARCRHRAAA AGALGQGCWA SSSETGGVAA RPVRGPGGRR VGQSRALSYS 120 SYGARTAAAP WAAAVTRHGW CMVELELDKQ GGGGGRAGGD FVLCKLFRSP RNEAPTTAVP 180 GLVSGCKRKA AVDDHPDTPP GVRQHLMQRS Y* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Sevir.9G167900.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004986380.1 | 1e-147 | uncharacterized protein LOC101758118 | ||||
TrEMBL | A0A368SHH0 | 1e-146 | A0A368SHH0_SETIT; Uncharacterized protein | ||||
STRING | Si039061m | 1e-99 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4363 | 21 | 58 |
Link Out ? help Back to Top | |
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Phytozome | Sevir.9G167900.1.p |