PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sevir.5G456300.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family | NAC | ||||||||
Protein Properties | Length: 224aa MW: 24893 Da PI: 8.6283 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 54.1 | 5.4e-17 | 29 | 155 | 7 | 128 |
NAM 7 FhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWk..atgkdkevls 94 F+Pt++elv ++L+++++g + +++ ++ e+d + + Pw+L +++ +++ +fF+ r ++ + +r ++ +g W +t ++v++ Sevir.5G456300.1.p 29 FDPTEDELVLHFLRPQLRGFPPRVAGAVLEADPCGAAPWELLARYG-LREQGHFFAARGRRRPF---VRRaVAGAGAWMhsSTRAGRSVTD 115 9***********************999**************85553.35677*******99874...55646789***8446677899999 PP NAM 95 kkgelvglkktLvfy......kgrapkgektdWvmheyrl 128 + + + + + fy + a + ++t Wvm+ey++ Sevir.5G456300.1.p 116 LGVVVRWSRVKFCFYtrggagGAGAGQQRSTGWVMDEYEI 155 88999999*******776643234555579********86 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 23.774 | 23 | 182 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 6.28E-27 | 28 | 182 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.3E-11 | 29 | 155 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence Send to blast |
MEHEEVNLSA EAEEAEDQQA AGDIVVDGFD PTEDELVLHF LRPQLRGFPP RVAGAVLEAD 60 PCGAAPWELL ARYGLREQGH FFAARGRRRP FVRRAVAGAG AWMHSSTRAG RSVTDLGVVV 120 RWSRVKFCFY TRGGAGGAGA GQQRSTGWVM DEYEITDPGC YRRRDEEGEE DEYWVLCRVR 180 KSKRPVPEAA KPASPPARQR WRKLAKLETD SGVKAKVSRP LRT* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Sevir.5G456300.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022682104.1 | 1e-159 | NAC domain-containing protein 2 | ||||
TrEMBL | A0A368RFW9 | 1e-158 | A0A368RFW9_SETIT; Uncharacterized protein | ||||
STRING | Si004307m | 1e-131 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP13761 | 25 | 28 |
Link Out ? help Back to Top | |
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Phytozome | Sevir.5G456300.1.p |