PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sevir.5G394700.5.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family | bZIP | ||||||||
Protein Properties | Length: 529aa MW: 56943.1 Da PI: 7.4626 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.9 | 3.4e-11 | 219 | 248 | 4 | 33 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLee 33 k err+++NReAAr+sR+RKka++++Le+ Sevir.5G394700.5.p 219 AKTERRLAQNREAARKSRLRKKAYVQQLET 248 799*************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 9.6E-8 | 216 | 292 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.3E-7 | 218 | 262 | No hit | No description |
PROSITE profile | PS50217 | 9.243 | 218 | 262 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.8E-8 | 219 | 249 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 6.88E-7 | 220 | 263 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 223 | 238 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 3.7E-28 | 301 | 374 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 529 aa Download sequence Send to blast |
MPKACVPRVI WAPRSPSSLS ACPAAGALSR RDFQPAAAAA AYFGFGELEE ALIHGGGGAS 60 ANAGGGVDPG VIIKSDAPAQ TKPAAAGYLA GAGGGRPPTL EIFPSWPMRH QQQLHSGNSQ 120 SVGSTTDSSS AQNTMSQMEL VSPASPAPRQ EVMMVTTDDY SYKPGLAAAP AAAPAPAPPS 180 FQQHHPALPL HLHGGGGGGG DHDKRKQGST RKDGKLVDAK TERRLAQNRE AARKSRLRKK 240 AYVQQLETSR IRLQQVEHEL QRARSQGLFV GGCSAAGDMS SGAAAFDMEY ARWLDDDGKR 300 LAELRGGLQA HLDGNLGLIV EECVQHYDEL FQLKAALAHE DVFHLLTGGW ATPAERCFFW 360 MGGFRPSELL KILIPQLDPL TEQQLLGICN LQQSSEQAEE ALAQGLHQLH QSLADTVAAG 420 TLNDGAAAPN YMSLMAVALE KLASLESFYQ QADNLRQQTL HQMRRILTTR QAARCFLSIG 480 EYYRRLRALS NLWASRPREN FIGTESLSPT ATELQVMHQQ QQNQFSGF* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Required for the formation of the blade-sheath boundary in leaves. Promotes flowering. {ECO:0000269|PubMed:9490265}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Sevir.5G394700.5.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AF036949 | 0.0 | AF036949.1 Zea mays basic leucine zipper protein (liguleless2) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022682635.1 | 0.0 | transcription factor LG2 isoform X2 | ||||
Swissprot | O49067 | 0.0 | LG2_MAIZE; Transcription factor LG2 | ||||
TrEMBL | K3XGD5 | 0.0 | K3XGD5_SETIT; Uncharacterized protein | ||||
STRING | Si000955m | 0.0 | (Setaria italica) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08320.2 | 1e-134 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Sevir.5G394700.5.p |
Publications ? help Back to Top | |||
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