PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sevir.4G298500.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
Family NAC
Protein Properties Length: 302aa    MW: 33580.3 Da    PI: 8.7315
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sevir.4G298500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM146.31.7e-45171453128
                 NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgk..rknratksgyWkatgkdke 91 
                         pGfrFhPt+eel+ +yLk+ + gkkl++ ++i++v++y+++Pw+Lp  ++ +e+ewyfF++rd+k+a g   r++r+t++g+Wkatg+d++
  Sevir.4G298500.1.p  17 PGFRFHPTEEELLEFYLKQVAYGKKLKF-DIIPTVQLYRHDPWELPGLARIGEREWYFFVPRDRKQAVGGsgRPSRTTERGFWKATGSDRA 106
                         9**************************9.99***************8778899*************964334******************* PP

                 NAM  92 vlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                         v ++   ++l+glkktLv+y+grap+g+ktdWvm+eyrl
  Sevir.4G298500.1.p 107 VRCAadPKRLIGLKKTLVYYEGRAPRGTKTDWVMNEYRL 145
                         **98777788***************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.02E-5214173IPR003441NAC domain
PROSITE profilePS5100552.43715173IPR003441NAC domain
PfamPF023659.3E-2417145IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    Send to blast
MRSHSSSVGG AAELELPGFR FHPTEEELLE FYLKQVAYGK KLKFDIIPTV QLYRHDPWEL  60
PGLARIGERE WYFFVPRDRK QAVGGSGRPS RTTERGFWKA TGSDRAVRCA ADPKRLIGLK  120
KTLVYYEGRA PRGTKTDWVM NEYRLPDVVV DNGAAAGNSS PKEDIVLCKI YRKAVSLKEL  180
EQRVAMEELA RASASATPSA SHNTGSPADS MSSSDQQGET TTMMMMGGVA IPPLATICMK  240
KEVVTESTAA VLRPATLSLP QLEVAKQPAQ QQEWMQDPFL TQLRSPWMES WSPYYASVLN  300
F*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A2e-471217311168Stress-induced transcription factor NAC1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapSevir.4G298500.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9676331e-144EU967633.1 Zea mays clone 304978 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004966508.10.0NAC domain-containing protein 67
SwissprotQ10S651e-104NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBLK3XYI60.0K3XYI6_SETIT; Uncharacterized protein
STRINGSi006994m0.0(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP177038105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.18e-83NAC domain containing protein 36
Publications ? help Back to Top
  1. Hong Y,Zhang H,Huang L,Li D,Song F
    Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice.
    Front Plant Sci, 2016. 7: p. 4
    [PMID:26834774]