PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sevir.4G148000.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family | BES1 | ||||||||
Protein Properties | Length: 360aa MW: 37778.6 Da PI: 8.3992 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 209.7 | 7.5e-65 | 15 | 163 | 2 | 148 |
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl..eeaeaagssasasp 90 g++r ptw+ErEnn+rRERrRRaiaaki+aGLRa+Gny+lpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp+ e+++ +g+sas sp Sevir.4G148000.1.p 15 GGTRVPTWRERENNRRRERRRRAIAAKIFAGLRAYGNYNLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPTaaERHDPIGRSASPSP 105 789************************************************************************9999************ PP DUF822 91 esslqsslkssalaspvesysaspksssfpspssldsislasa........asllpvlsvlslvss 148 +ss+q +sp++sy++sp+sssfps+ s+++i+l + +sl+p+l++ls++ss Sevir.4G148000.1.p 106 CSSYQ--------PSPRASYNPSPASSSFPSSGSSSHITLGGNnfiggvegSSLIPWLKNLSSSSS 163 *****........9************************9998899*****9*********998655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 4.7E-70 | 15 | 159 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Sequence ? help Back to Top |
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Protein Sequence Length: 360 aa Download sequence Send to blast |
MTSGAGGGGG GGGLGGTRVP TWRERENNRR RERRRRAIAA KIFAGLRAYG NYNLPKHCDN 60 NEVLKALCNE AGWTVEPDGT TYRKGCKPTA AERHDPIGRS ASPSPCSSYQ PSPRASYNPS 120 PASSSFPSSG SSSHITLGGN NFIGGVEGSS LIPWLKNLSS SSSIASSSKF PQLHHLYFNG 180 GSISAPVTPP SSSPTRTPRI KTDWENPSVQ PPWAGCGSNY ASLPNSQPPS PGHQVAPDPT 240 WLSGFRISSA GPSSPTYSLV APNPFGIFKE TVASTSRMCT PGQSGTCSPV MGGVPIHHDV 300 QMVDGTPDDF AFGSSSNGNN QSPGLVKAWE GERIHEECAS DEHELELTLG SSKTRADPS* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 4e-24 | 18 | 92 | 372 | 446 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 4e-24 | 18 | 92 | 372 | 446 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 4e-24 | 18 | 92 | 372 | 446 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 4e-24 | 18 | 92 | 372 | 446 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
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Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | May function in brassinosteroid signaling. {ECO:0000250}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Sevir.4G148000.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004965584.1 | 0.0 | protein BZR1 homolog 3 | ||||
Swissprot | Q5Z9E5 | 0.0 | BZR3_ORYSJ; Protein BZR1 homolog 3 | ||||
TrEMBL | A0A368QVV1 | 0.0 | A0A368QVV1_SETIT; Uncharacterized protein | ||||
STRING | Si006761m | 0.0 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1366 | 38 | 112 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78700.1 | 4e-61 | BES1/BZR1 homolog 4 |
Link Out ? help Back to Top | |
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Phytozome | Sevir.4G148000.1.p |
Publications ? help Back to Top | |||
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