PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sevir.3G229900.4.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family | bZIP | ||||||||
Protein Properties | Length: 432aa MW: 48135.2 Da PI: 6.8888 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 36 | 1.5e-11 | 119 | 148 | 4 | 33 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLee 33 k err+++NReAAr+sR+RKka++++Le+ Sevir.3G229900.4.p 119 AKTERRLAQNREAARKSRLRKKAYVQQLET 148 799*************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.8E-6 | 116 | 192 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.312 | 118 | 161 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.4E-8 | 119 | 149 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.7E-7 | 120 | 162 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.0E-7 | 120 | 149 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 123 | 138 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 2.3E-28 | 200 | 275 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 432 aa Download sequence Send to blast |
MYAAAGYLAA RPPTLEIFPS WPMSHLQQPY SGNSHSVGST SESSSGQNAM PQAELVSPGS 60 MRADSGQQQE VLMVTVDDYN YEQGLGVAAT TAPIFQQHTE SQDKRKQGST RKDGKLLDAK 120 TERRLAQNRE AARKSRLRKK AYVQQLETSR IRLQQIEQEL QGARSQGLFP GGGSASGDMN 180 SGALMFDMEY ARWLEDDSKH MTQLQGILQA QNIDANLGTI VEECMRHYDE LFHLRAMLAR 240 SDVFHLMTGL WATTAERCFL WMGGFRPSEI LKMLIPQLDP LTEQQLLGMC NLQRSSEQTE 300 EALVQGLQQL HKSLADAVGA SPLSDGANVA NYTALMALAL DRLDTLESFY RQADNLRQQT 360 LHHMRRLLTT RQTARCFLSI GEYHRRLRAL SSVWASRPLE SFVAAAENVS PTGTAEQAIH 420 HPYHQSQFSG F* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Sevir.3G229900.4.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_012699864.1 | 0.0 | transcription factor TGAL5 isoform X3 | ||||
Swissprot | Q6F2N0 | 0.0 | TGAL5_ORYSJ; Transcription factor TGAL5 | ||||
TrEMBL | K3Z6D7 | 0.0 | K3Z6D7_SETIT; Uncharacterized protein | ||||
STRING | Si022106m | 0.0 | (Setaria italica) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08320.2 | 1e-127 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | Sevir.3G229900.4.p |
Publications ? help Back to Top | |||
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