PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sevir.3G199800.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family | bZIP | ||||||||
Protein Properties | Length: 332aa MW: 36537.3 Da PI: 8.2168 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 30.7 | 6.7e-10 | 47 | 86 | 5 | 41 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 k+ rr+++NReAAr+sR+RKka++e+Le+ k ++Le+e Sevir.3G199800.2.p 47 KALRRLAQNREAARKSRLRKKAYVEQLENsrlKLAQLEQE 86 788*************************933334444444 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.9E-7 | 39 | 91 | No hit | No description |
SMART | SM00338 | 7.0E-6 | 43 | 112 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 8.979 | 45 | 89 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.7E-7 | 47 | 85 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.63E-6 | 47 | 89 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 50 | 65 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 3.4E-32 | 128 | 204 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 332 aa Download sequence Send to blast |
MAYASPGTDT STDLDTDEKN QMLELGRLAS LTASGSGDKS NDKLGQKALR RLAQNREAAR 60 KSRLRKKAYV EQLENSRLKL AQLEQELQRA RKQGIFIPTP GDQPHSTSEN ALAFDMGYAR 120 WQEDHKKQID ELRTALNAHA SDDDLRRITD SIMAHYCEAF RLKGAAAKAD AFHVLSAMWK 180 TPVERCFLWL GGFRPSELLK LLASHLEPLT EQQLASICNL QQSSQQAEED LSQGVKALQQ 240 SVAKTLASGP LCPAGSSGSA ADCSGQMAVA IGELGTLVNF LEEADNLRLQ TLQQMQRILT 300 TRQSARALLA ISDYSSRLRA LSSLWIARPR E* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Sevir.3G199800.2.p |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004961656.1 | 0.0 | transcription factor TGAL1 | ||||
Swissprot | Q41558 | 1e-175 | HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment) | ||||
TrEMBL | K3Z7V6 | 0.0 | K3Z7V6_SETIT; Uncharacterized protein | ||||
STRING | Si022626m | 0.0 | (Setaria italica) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12250.2 | 1e-146 | TGACG motif-binding factor 6 |
Link Out ? help Back to Top | |
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Phytozome | Sevir.3G199800.2.p |