PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sevir.2G356900.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family | NAC | ||||||||
Protein Properties | Length: 294aa MW: 31676.1 Da PI: 5.0737 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 34.2 | 7.2e-11 | 25 | 125 | 32 | 127 |
NAM 32 evikevdiykvePwdLpkkvka..eekewyfFskrdkkyatgk....rknr.atksgyWkatgkdkevlskkgelvglkktLvfykgrapk 115 +++++vd++++ P+dL + ++ ++ wyf++ ++ k+++g+ r++ a+++ W++ k+v+ ++ g+ L + +++ ++ Sevir.2G356900.1.p 25 HFVHHVDVCSAAPEDLVADLEPapGTGVWYFYCVKKYKSTHGRpgghRQRAiAASDTCWHSEAGAKDVKG--SQGGGTVCNLSYGRKDGRS 113 5699************853333226669********9999644444266556677999**********87..66689999******999** PP NAM 116 gektdWvmheyr 127 ++ W+m ey Sevir.2G356900.1.p 114 FTRLGWCMMEYD 125 ***********5 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 15.617 | 1 | 141 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.57E-15 | 20 | 141 | IPR003441 | NAC domain |
Pfam | PF02365 | 9.1E-5 | 43 | 124 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 294 aa Download sequence Send to blast |
MAAEDTGDDA SIALLHRLRS GATVHFVHHV DVCSAAPEDL VADLEPAPGT GVWYFYCVKK 60 YKSTHGRPGG HRQRAIAASD TCWHSEAGAK DVKGSQGGGT VCNLSYGRKD GRSFTRLGWC 120 MMEYDDATGG GDHVLCKIYR SPRAQGKPSS AASKTSSGSK RKAGGEHTEA RPAKLLHEQD 180 TFFTNDYAMP STVAQVNVGG GEEQHLSTQD GEFVETSYGL LPSDVAQVNV EEWIRGMEMF 240 GGEEEQQISK PEQDDGFVKV PPLMTEDITV EDYLLAPETT CKQGSCMNQT CCA* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Sevir.2G356900.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002463549.1 | 6e-50 | uncharacterized protein LOC8079646 | ||||
TrEMBL | A0A368Q6E2 | 0.0 | A0A368Q6E2_SETIT; Uncharacterized protein | ||||
TrEMBL | K4A2T0 | 0.0 | K4A2T0_SETIT; Uncharacterized protein | ||||
STRING | Si033182m | 0.0 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4574 | 6 | 32 |
Link Out ? help Back to Top | |
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Phytozome | Sevir.2G356900.1.p |