PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Sevir.1G165700.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
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Family | NAC | ||||||||
Protein Properties | Length: 501aa MW: 53490.2 Da PI: 5.8664 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 69.4 | 9.5e-22 | 6 | 137 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWk..atgk 88 lppG+ F P+de v +yL +++ g +l+++ i + d +++ P++L + +++++e +fF++ + + +g++++r + g W+ +t Sevir.1G165700.1.p 6 LPPGILFAPEDEVAVEHYLLPRLLGWPLPADGLILDDDPLSAPPQELL-ERNGRKEEAFFFAEGQPRCGKGTQQKRtCAGGGWWEgqKTCA 95 79****************************999**************7.456678899******************555566676333333 PP NAM 89 dkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 + + l+ +ge+ + kk L f+ g k +t Wvmhey++ Sevir.1G165700.1.p 96 EGDKLRVpgGGEAAWRKKALNFHCGGGGKKGSTGWVMHEYAV 137 3333222569999**********98888888*********86 PP | |||||||
2 | NAM | 53.3 | 9.1e-17 | 168 | 287 | 11 | 128 |
NAM 11 deelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgk..dkevlskkge 98 d + v +yL ++v +++l+l+ i + d +++ Pw+L + ++++++ +fF+ + k+ +g+r++r + g+W+ + d e l++ Sevir.1G165700.1.p 168 DCDAVAHYLLPRVLRQPLPLDGLILDDDPLSAPPWELL-ERNGRKEDAFFFALGQAKSGKGSRQRRtCAGGGFWNGERTcvDGEELRA--- 254 77889***************999**************7.445677899******************77789***94433114443333... PP NAM 99 l.....vglkktLvfykgrapkgektdWvmheyrl 128 + kk + f +g ++ +t Wvmhey++ Sevir.1G165700.1.p 255 PglaggAWRKKAFSFQDGCEKG--STGWVMHEYAI 287 033345899******9876666..8********86 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 1.57E-31 | 3 | 155 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 28.023 | 6 | 156 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.8E-13 | 7 | 136 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 18.894 | 158 | 306 | IPR003441 | NAC domain |
Pfam | PF02365 | 6.7E-10 | 168 | 286 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 7.98E-22 | 168 | 306 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 501 aa Download sequence Send to blast |
MAATGLPPGI LFAPEDEVAV EHYLLPRLLG WPLPADGLIL DDDPLSAPPQ ELLERNGRKE 60 EAFFFAEGQP RCGKGTQQKR TCAGGGWWEG QKTCAEGDKL RVPGGGEAAW RKKALNFHCG 120 GGGKKGSTGW VMHEYAVTAP EDLARSPLRL CHIRLSSYGR KQSGAMEDCD AVAHYLLPRV 180 LRQPLPLDGL ILDDDPLSAP PWELLERNGR KEDAFFFALG QAKSGKGSRQ RRTCAGGGFW 240 NGERTCVDGE ELRAPGLAGG AWRKKAFSFQ DGCEKGSTGW VMHEYAITAP DHLAASQLRL 300 YRLRFSGHGR KRKREEADNE AAPTTARRRV AEDALLDMPS LHPICSSVAL ADQANVNYVN 360 GAEHHAAAAA EVNCINVNGA QHYAAPVTVS AGHDLTTGGI DTSWDFSILE NFDELDELMS 420 SIGDGGDLPS ANPGVLPAVM SPGACVDADA AVSGLFYQAA AYPGVGTGLV APSAPGMYRG 480 CMEPPGSFFS PVPHHFYAAC * |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Sevir.1G165700.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025813463.1 | 0.0 | uncharacterized protein LOC112890817 | ||||
TrEMBL | K3YZR5 | 0.0 | K3YZR5_SETIT; Uncharacterized protein | ||||
STRING | Si019775m | 0.0 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP802 | 22 | 137 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G17730.1 | 1e-11 | NAC domain containing protein 57 |
Link Out ? help Back to Top | |
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Phytozome | Sevir.1G165700.1.p |