PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PGSC0003DMP400065842 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Family | bHLH | ||||||||
Protein Properties | Length: 102aa MW: 11589.7 Da PI: 10.7814 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 12.6 | 0.00025 | 14 | 45 | 31 | 51 |
..............TTS-STCHHHHHHHHHHH CS HLH 31 s...........kapskKlsKaeiLekAveYI 51 + +++k+ +K iL+kA+ I PGSC0003DMP400065842 14 FatmkakeqgkdTTGQKRANKLKILRKAILVI 45 155555566663445556***********888 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 102 aa Download sequence Send to blast |
MPNLCSKLML KCLFATMKAK EQGKDTTGQK RANKLKILRK AILVITKTTR RAIEWLFSSP 60 KVPACQPWGR TDLATEMGSR WIIELIRDSN LDRLKSQNLE D* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | PGSC0003DMP400065842 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | M1DTJ8 | 3e-67 | M1DTJ8_SOLTU; Uncharacterized protein | ||||
STRING | PGSC0003DMT400094167 | 5e-68 | (Solanum tuberosum) |
Link Out ? help Back to Top | |
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Phytozome | PGSC0003DMP400065842 |
Publications ? help Back to Top | |||
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