PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PGSC0003DMP400035838
Organism
Solanum tuberosum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Family EIL
Protein Properties Length: 453aa    MW: 52595.3 Da    PI: 4.9436
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PGSC0003DMP400035838genomePGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3362.86.1e-111212951286
                           XXXXXXXXXXXXXXXXXXXXXXX..XXXXX....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                  EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaa...tgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpveg 86 
                           ++lk+rmw d+m+++ lk+    +  ++e +    ++++s+  +eq+rrkkmsraQD+iLkYM+k+me+c+ qGfvYgi+pekgkpv+g
  PGSC0003DMP400035838  21 DDLKRRMWEDRMRMQILKRDMIINSTSEELSldqESEEESEAKQEQSRRKKMSRAQDSILKYMVKIMEICKGQGFVYGIVPEKGKPVTG 109
                           79*************9998887777777766443445566699********************************************** PP

                           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH--- CS
                  EIN3  87 asdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPt 175
                           +sdsLr+WWk+kv+f++n+p+ai  +    l++++  +     +s    l++lqDTtlgSLLs+lmqhc ppqrrfpl+kg++pPWWPt
  PGSC0003DMP400035838 110 SSDSLREWWKDKVRFEKNAPNAILPK----LVQEN--H----VNSCMDLLNDLQDTTLGSLLSSLMQHCIPPQRRFPLDKGLAPPWWPT 188
                           ***********************988....55442..2....34567889*************************************** PP

                           S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXX CS
                  EIN3 176 GkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahs 264
                           Gkelwwg +g+s++qg+ppykkphdlkkawkvsvL+  ikhms +++++r l+ qsk+lq+km+ake++++++v+nqee +++  + + 
  PGSC0003DMP400035838 189 GKELWWGDQGFSQQQGPPPYKKPHDLKKAWKVSVLAGIIKHMSVNFDKMRMLVKQSKSLQNKMTAKETATWSKVVNQEEVLVEMTQKSL 277
                           *******************************************************************************9885433332 PP

                           XXXXXXXXXXXXXXXXXXXXX...X CS
                  EIN3 265 sslrkqspkvtlsceqkedve...g 286
                           +        + +s+e+++d      
  PGSC0003DMP400035838 278 R-------IISISKEEEDDEYlalR 295
                           2.......23333333322223332 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048732.5E-11021267No hitNo description
Gene3DG3DSA:1.10.3180.101.0E-64141274IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167685.75E-57147270IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0080167Biological Processresponse to karrikin
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 453 aa     Download sequence    Send to blast
MEPLSPINSE EIIEDEEINY DDLKRRMWED RMRMQILKRD MIINSTSEEL SLDQESEEES  60
EAKQEQSRRK KMSRAQDSIL KYMVKIMEIC KGQGFVYGIV PEKGKPVTGS SDSLREWWKD  120
KVRFEKNAPN AILPKLVQEN HVNSCMDLLN DLQDTTLGSL LSSLMQHCIP PQRRFPLDKG  180
LAPPWWPTGK ELWWGDQGFS QQQGPPPYKK PHDLKKAWKV SVLAGIIKHM SVNFDKMRML  240
VKQSKSLQNK MTAKETATWS KVVNQEEVLV EMTQKSLRII SISKEEEDDE YLALRRKEKR  300
KGTVFESDID IDDMLYQNLN CVQSELGVGF YRTMNEQQSV RGEDESLNMF MSNFTSLIGR  360
QPRPHEEIMV GDDHHGEHDW VNMEIKRTFE NYHIAQNANG GSVEENFQGF WGDNNNVLHY  420
GNIMNLNDTP KENEQHQSPL SVWDLAYEDT SE*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A2e-551492706127Protein ETHYLENE INSENSITIVE 3
4zds_B2e-551492706127Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1294300RRKEKRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapPGSC0003DMP400035838
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG9754430.0HG975443.1 Solanum pennellii chromosome ch04, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006355383.10.0PREDICTED: putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLM1BUH20.0M1BUH2_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000531470.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA30423178
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10120.11e-110EIL family protein
Publications ? help Back to Top
  1. Xu X, et al.
    Genome sequence and analysis of the tuber crop potato.
    Nature, 2011. 475(7355): p. 189-95
    [PMID:21743474]