PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.4181s0010.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family bZIP
Protein Properties Length: 197aa    MW: 22936.2 Da    PI: 6.0229
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.4181s0010.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.53.9e-1582133556
                             CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                             +++rr+++NRe+ArrsR RK++ ++eL   v  L +eN++L +++++  +  
  SapurV1A.4181s0010.1.p  82 RKQRRMISNRESARRSRMRKQKHLDELWSQVVWLRNENHQLVEKVNHVAECH 133
                             689******************************************9988755 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.0E-1578142IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.59980150IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.8E-1382155No hitNo description
PfamPF001705.1E-1382131IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.48E-1382131No hitNo description
CDDcd147022.63E-1883134No hitNo description
PROSITE patternPS00036085100IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    Send to blast
MQPNEIARLH YPVHPNSSPY SAHFSMTQNN SQMFEFNHFT NQSYNFQFPP QVQEFSLQAS  60
SMSSHSTSDE ADEQQLSLIN ERKQRRMISN RESARRSRMR KQKHLDELWS QVVWLRNENH  120
QLVEKVNHVA ECHDQVAQEN NQLKEEISDL RQMLTDMQLN SPYPSLKDLE NITCDTAYFR  180
AESSNQSITS SSDLLG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
194101RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.4181s0010.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2101390.0AC210139.1 Populus trichocarpa clone POP113-I04, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011012258.11e-125PREDICTED: basic leucine zipper 43-like
SwissprotQ9FMC23e-41BZP43_ARATH; Basic leucine zipper 43
TrEMBLB9NC161e-120B9NC16_POPTR; BZIP family protein
STRINGPOPTR_0004s10990.11e-121(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF16043399
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.16e-49basic leucine-zipper 42
Publications ? help Back to Top
  1. Nowak K,Gaj MD
    Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis.
    J. Plant Physiol., 2016. 193: p. 119-26
    [PMID:26973252]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]