PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.4039s0010.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family WRKY
Protein Properties Length: 417aa    MW: 46200.2 Da    PI: 5.5842
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.4039s0010.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY75.37.6e-24209265259
                             --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                    WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                              DgynWrKYGqK+vk+ + +rsYY+Ct+ +C++kk +e+s++ ++v+ei+++g H h+
  SapurV1A.4039s0010.1.p 209 PDGYNWRKYGQKQVKSPKGSRSYYKCTYFDCCAKK-IECSDHSGHVIEIVNKGMHCHD 265
                             5********************************98.********************97 PP
2WRKY34.44.5e-11382402323
                             -SS-EEEEEEE--TT-SS-EE CS
                    WRKY   3 DgynWrKYGqKevkgsefprs 23 
                             Dgy+WrKYGqK+vkg+++pr+
  SapurV1A.4039s0010.1.p 382 DGYRWRKYGQKMVKGNPHPRQ 402
                             9******************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081116.191203267IPR003657WRKY domain
SuperFamilySSF1182906.8E-19204267IPR003657WRKY domain
Gene3DG3DSA:2.20.25.806.6E-18206267IPR003657WRKY domain
SMARTSM007745.2E-22208266IPR003657WRKY domain
PfamPF031062.9E-15210264IPR003657WRKY domain
Gene3DG3DSA:2.20.25.803.1E-11365402IPR003657WRKY domain
SuperFamilySSF1182908.11E-9375402IPR003657WRKY domain
PROSITE profilePS5081113.701375401IPR003657WRKY domain
SMARTSM007749.1E-6380416IPR003657WRKY domain
PfamPF031063.6E-7382402IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 417 aa     Download sequence    Send to blast
MAENESFEAL AVQNKEQKRQ GNEQNDGDFV GEELEGDCNE EEEEEEEKEE KENQLSELQQ  60
IVPNSQKEEE VREEQVETLT VAPQSSTEIL PKENDRYSGL KGNSAAETHV EAEYKEQVGS  120
SHQEVLGNVA DKSSEAQTQN QLQPSLCPTS LSELSPTSVT QPISSAPSPS PAKKISPPEV  180
KNAGITEAGD RSSAGLKALY VPVARTSIPD GYNWRKYGQK QVKSPKGSRS YYKCTYFDCC  240
AKKIECSDHS GHVIEIVNKG MHCHDPPRKN KGTRKSRSGL SVGPILQTTV TEHTVRMLKD  300
SEPDTLSMEL VQETSAISER KRQSSSSSDE SKETQIKEEN IGEPEPKRRL KGNLECSKSV  360
LKPGKKPKFV VHAAGDVGIT GDGYRWRKYG QKMVKGNPHP RQSNKDVKVF PTILSIE
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.4039s0010.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankGQ3774500.0GQ377450.1 (Populus tomentosa x P. bolleana) x P. tomentosa WRKY transcription factor 30 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024446055.10.0probable WRKY transcription factor 32 isoform X2
TrEMBLA0A2K1WZ370.0A0A2K1WZ37_POPTR; Uncharacterized protein
STRINGPOPTR_0018s11630.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF51983456
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G30935.12e-70WRKY DNA-binding protein 32