PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.4004s0010.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | bZIP | ||||||||
Protein Properties | Length: 335aa MW: 37245.6 Da PI: 5.4346 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.4 | 4.8e-11 | 135 | 193 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r + NR +A rs +RK ++ eLe+kv +L++e ++L +l + ++l++e+ SapurV1A.4004s0010.1.p 135 KRAKRIMANRQSAARSKERKARYVLELERKVHTLQTESTSLSAQLTLFQRDTSSLTTEN 193 9*********************************************9999999999887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.2E-15 | 131 | 195 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.806 | 133 | 196 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.2E-9 | 135 | 193 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.06E-10 | 135 | 189 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 5.3E-10 | 135 | 190 | No hit | No description |
CDD | cd14703 | 2.57E-21 | 136 | 185 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 335 aa Download sequence Send to blast |
MQDSSNSDAS EFPFRGSCHR RAHSDVPFRV TDDLDLFPDD LVSEEDIFCS YMDMEKLGSR 60 PEEGPSGMKQ DNAGHESAGG GGGVQDVEEE QERAYLKPRH KYSNSVDGSS LMESIDSKKA 120 MAPEKLAELW ALDPKRAKRI MANRQSAARS KERKARYVLE LERKVHTLQT ESTSLSAQLT 180 LFQRDTSSLT TENSELKLQL QAMEQQAQLR DALNEALKKE VERLKFATGE IMTPTDSYNL 240 GMQHIPFNHS LLVSPRPRPG SADALNIQIP QFHPLQSNLS PCQPAIASLH SHALSEMLPQ 300 DTLRWAQGFD ISSRSSVLVR SECHSISASE DCSL* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcrition factor that may participate with bZIP34 in the gametophytic control of pollen development. {ECO:0000269|PubMed:27896439}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.4004s0010.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AC210382 | 1e-159 | AC210382.1 Populus trichocarpa clone POP018-P22, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024439088.1 | 0.0 | bZIP transcription factor 18 isoform X1 | ||||
Swissprot | O22873 | 2e-99 | BZP18_ARATH; bZIP transcription factor 18 | ||||
TrEMBL | B9I8D7 | 0.0 | B9I8D7_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0013s09350.1 | 0.0 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1548 | 34 | 97 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40620.1 | 1e-88 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.4004s0010.1.p |
Publications ? help Back to Top | |||
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