PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.2969s0020.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family bZIP
Protein Properties Length: 449aa    MW: 49332.7 Da    PI: 7.5068
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.2969s0020.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_139.71.1e-12276330357
                             XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                             + kr rr+q+NRe+ArrsR+RK+a++ e e+ v +L  e+++L ++    +++++
  SapurV1A.2969s0020.1.p 276 DAKRVRRMQSNRESARRSRRRKQAQLNERETQVGQLRDERSSLLSRFTDVNQKCD 330
                             579*******************************************999999997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.8E-13274338IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.9E-9276330No hitNo description
PROSITE profilePS5021710.53276328IPR004827Basic-leucine zipper domain
PfamPF001701.6E-9277330IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.19E-8278327No hitNo description
PROSITE patternPS000360281296IPR004827Basic-leucine zipper domain
PfamPF124981.7E-28345446IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:2000693Biological Processpositive regulation of seed maturation
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 449 aa     Download sequence    Send to blast
MISWLILVGI NEPLRLSKID NKFTRTKKSR ERISTEGRKE QTMNRVFSVD DFSDTFWPSP  60
PPSPPSTAPP MNRSESEWAL ERFLQEVSAA PVSSSAGNTN TAAPSARSQS STSSIPPENG  120
EDEVVEITKH PIHHRHHLKN PNPHPQPLDR NLTNPIDSEE YRAFLKSKLD LACTAVAMSR  180
ESNVIKPEDL SSSLEDQKLA DGNVSLGSQA FRTGHGISMA QIGADGGSLG IPAFPITQKK  240
QEAQTRQTTS GSSGEDSDDD DLEGDTGTNE NRGPTDAKRV RRMQSNRESA RRSRRRKQAQ  300
LNERETQVGQ LRDERSSLLS RFTDVNQKCD ASAIDNRILK ADIETLRAKV KMVEEQVKRV  360
TGLNPVLLAG SNMRSPGMPF VGGHVDASTN VDVPMQPNPH QFFHHPIHGI TPAPPHLQRL  420
NNNSFPNNNL VPHATNPQTD NGTINNGG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1290297RRSRRRKQ
2292297SRRRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.2969s0020.1.p
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF1470420.0EF147042.1 Populus trichocarpa clone WS01226_K01 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011042439.10.0PREDICTED: light-inducible protein CPRF2
TrEMBLA9PFC50.0A9PFC5_POPTR; Uncharacterized protein
STRINGPOPTR_0005s23900.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF136911825
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54620.11e-54basic leucine zipper 25