PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.2901s0030.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | bZIP | ||||||||
Protein Properties | Length: 423aa MW: 46502.3 Da PI: 6.4601 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 30.4 | 8.3e-10 | 219 | 277 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 kr++r NR +A rs +RK +i+eLe+kv++L++e ++L +l l+ l++e+ SapurV1A.2901s0030.1.p 219 KRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNVLTAEN 277 9********************************************99998887777766 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.4E-15 | 215 | 279 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.921 | 217 | 280 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.6E-8 | 219 | 273 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.06E-10 | 219 | 273 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.4E-10 | 219 | 273 | No hit | No description |
CDD | cd14703 | 2.04E-25 | 220 | 269 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 423 aa Download sequence Send to blast |
MDKDKSTSHH SSGLPPPPGR YSSFSPSGSS FNLKPEQSPS TFPPMAPGSS SDPNHFGHGS 60 DSNRYSHDIS RMSDNPPKNL GHRRAHSEIL TLPDDISFDS DLGVVGGGAD GPTFSDETEE 120 DLLSMYLDMD KFNSSSATST FQVGESLAPA MAPLPATVNL GDGPSERPRV RHQHSQSMDG 180 STTIKPEMLM SGSEEASPAD SKKAVSAAKL AELALIDPKR AKRIWANRQS AARSKERKMR 240 YIAELERKVQ TLQTEATSLS AQLTLLQRDT NVLTAENSEL KLRLQTMEQQ VHLQDALNDA 300 LKEEIQHLKV LTGQMPNGGP MMNFASFGGG QQLYPNNQSM HTFLAAQQFQ QLQIHSQKQQ 360 QQQQQQQQQQ QFQLHQLQQH QLQQQQEQQQ QQQGGDLKMR GSLNSSSQKD NGSEANSSSS 420 KD* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor with an activatory role. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00126 | DAP | Transfer from AT1G06070 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.2901s0030.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_006372845.1 | 0.0 | probable transcription factor PosF21 | ||||
Swissprot | Q04088 | 1e-157 | POF21_ARATH; Probable transcription factor PosF21 | ||||
TrEMBL | U5FMQ7 | 0.0 | U5FMQ7_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0017s05610.1 | 0.0 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5517 | 32 | 49 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06070.1 | 1e-167 | bZIP family protein |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.2901s0030.1.p |
Publications ? help Back to Top | |||
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