PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SapurV1A.2522s0020.1.p

Organism

Salix purpurea

Taxonomic ID

77065

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix

Family

bZIP

Protein Properties

Length: 100aa MW: 11786.5 Da PI: 9.9945

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SapurV1A.2522s0020.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	21.8	4.1e-07	13	68	7	62
HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 7 errkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 e++k k Re +r+Rq+Kk+ i+e ++k + +eN+ Lk ++eel+ke+ lks+ SapurV1A.2522s0020.1.p 13 EMKKRKKRETDKRYRQKKKKAIQETKNKLAMAITENENLKRTVEELRKEIFDLKSQ 68 899************************************************99997 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	3.1E-5	13	67	No hit	No description
PROSITE profile	PS50217	8.703	15	68	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 100 aa Download sequence Send to blast
MSTGAQTGLN TEEMKKRKKR ETDKRYRQKK KKAIQETKNK LAMAITENEN LKRTVEELRK 60 EIFDLKSQRQ WIEQRFETMY NDLKKEIECG PAEAEGFGE*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	14	18	KKRKK
2	17	31	KKRETDKRYRQKKKK

Cis-element ? help Back to Top
Source	Link
PlantRegMap	SapurV1A.2522s0020.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002299106.1	4e-32	uncharacterized protein LOC7457698
TrEMBL	B9GLE6	1e-30	B9GLE6_POPTR; Uncharacterized protein
STRING	POPTR_0001s04210.1	2e-31	(Populus trichocarpa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF17134	3	8

Link Out ? help Back to Top
Phytozome	SapurV1A.2522s0020.1.p