PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.1979s0020.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family G2-like
Protein Properties Length: 187aa    MW: 21425.3 Da    PI: 6.7977
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.1979s0020.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like91.57.2e-291871255
                 G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                            prlrWtpeLHe+Fve v++LGG+ kAtP++il++m+v+ L ++h+kSHLQ+YR+
  SapurV1A.1979s0020.1.p 18 PRLRWTPELHEHFVETVDRLGGKYKATPRRILQMMGVNELKISHIKSHLQMYRS 71
                            9****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.1E-261572IPR009057Homeodomain-like
SuperFamilySSF466891.4E-131671IPR009057Homeodomain-like
TIGRFAMsTIGR015571.1E-211872IPR006447Myb domain, plants
PfamPF002491.0E-71970IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    Send to blast
MKISRKNGAR QYIKSEHPRL RWTPELHEHF VETVDRLGGK YKATPRRILQ MMGVNELKIS  60
HIKSHLQMYR SMKGPQNINV LIPMKKHLQA ERSQLDDMGI SSIFSSQRLL QGEYLMELEC  120
ERSDSKYDIF FDESNGLQLT KEEGGDPEQQ DSGTSFVGRM SVEENIDRLP AETCELSLSF  180
TPSMSS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A2e-161973357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B2e-161973357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C2e-161973357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D2e-161973357Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.1979s0020.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011032774.11e-119PREDICTED: uncharacterized protein LOC105131474
TrEMBLA0A2K2AJP13e-96A0A2K2AJP1_POPTR; Uncharacterized protein (Fragment)
STRINGPOPTR_0002s05770.13e-94(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF91862839
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14600.16e-25G2-like family protein