PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.1440s0010.10.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family HD-ZIP
Protein Properties Length: 728aa    MW: 79965.4 Da    PI: 5.528
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.1440s0010.10.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.92.4e-2060115156
                              TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
                 Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                              +++ +++t++q++e+e++F+++++p+ ++r+eL+++lgL+  qVk+WFqN+R+++k
  SapurV1A.1440s0010.10.p  60 KKRYHRHTQHQIQEMESFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK 115
                              688999***********************************************999 PP
2START217.64.2e-682494691206
                              HHHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S CS
                    START   1 elaeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddkeqWdetla 77 
                              ela +a++elv++a+ +ep+W++s     + +n+de++++f+++ +     ++ ea+r+s+vv+m++ +lve l+d++ qW++ + 
  SapurV1A.1440s0010.10.p 249 ELAVAAMEELVRMAQMDEPLWMSSLdgtnSVLNEDEYVRIFPRGIGpkptgFKCEASRESAVVIMNHINLVEYLMDVN-QWSTLFS 333
                              57899**********************9999************999********************************.******* PP

                              ....EEEEEEEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEE CS
                    START  78 ....kaetlevissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgi 152
                                  +a tlev+s+g      galq+m+ae q+++pl+p R+++fvRy++q+ +g+w++vdvS+d+ ++ p     +R++++pSg+
  SapurV1A.1440s0010.10.p 334 givsRALTLEVLSTGvagnynGALQVMTAECQLPTPLAPtRESYFVRYCKQHADGTWAVVDVSLDNLRPSPA----ARCRRRPSGC 415
                              *********************************************************************995....********** PP

                              EEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
                    START 153 liepksnghskvtwvehvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                              li+++ ng+skvtwvehv+ ++r +h+l+++lv+sg+a+gak+w+atl+rqce+
  SapurV1A.1440s0010.10.p 416 LIQEMLNGYSKVTWVEHVEADDRGVHNLYKQLVSSGHAFGAKRWLATLDRQCER 469
                              ****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.602.3E-2239115IPR009057Homeodomain-like
SuperFamilySSF466899.61E-2046117IPR009057Homeodomain-like
PROSITE profilePS5007116.98957117IPR001356Homeobox domain
SMARTSM003891.0E-1958121IPR001356Homeobox domain
PfamPF000465.7E-1860115IPR001356Homeobox domain
CDDcd000863.47E-1960118No hitNo description
PROSITE patternPS00027092115IPR017970Homeobox, conserved site
PROSITE profilePS5084843.814240472IPR002913START domain
SuperFamilySSF559617.3E-34240471No hitNo description
CDDcd088754.65E-129244468No hitNo description
SMARTSM002342.2E-65249469IPR002913START domain
PfamPF018522.3E-57250469IPR002913START domain
Gene3DG3DSA:3.30.530.205.0E-4345434IPR023393START-like domain
SuperFamilySSF559618.55E-24488719No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010090Biological Processtrichome morphogenesis
GO:0048497Biological Processmaintenance of floral organ identity
GO:0008289Molecular Functionlipid binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 728 aa     Download sequence    Send to blast
MFQPNMMEGQ LHRLDMAQNT HEGDMARIRD DEFDSTNTKS GGSENQDGAS GDDQDPRPKK  60
KRYHRHTQHQ IQEMESFFKE CPHPDDKQRK ELSRELGLEP LQVKFWFQNK RTQMKTQHER  120
HENTQLRNEN DKLRADNMRY REALSNASCP NCGGPTAIGE MSFDEHHLRL ENARLREEID  180
RISAIAAKYV GKPVVNYPLI SAPMPPRPLD LGVGNFGGQP GIEGEIYGDG DLLRSINAPT  240
EADKPMIIEL AVAAMEELVR MAQMDEPLWM SSLDGTNSVL NEDEYVRIFP RGIGPKPTGF  300
KCEASRESAV VIMNHINLVE YLMDVNQWST LFSGIVSRAL TLEVLSTGVA GNYNGALQVM  360
TAECQLPTPL APTRESYFVR YCKQHADGTW AVVDVSLDNL RPSPAARCRR RPSGCLIQEM  420
LNGYSKVTWV EHVEADDRGV HNLYKQLVSS GHAFGAKRWL ATLDRQCERL ASAMATNIPA  480
GDVGVITNQE GRKSMMKLAE RMVISFCAGV SASTAHTWTT LSGTGADDVR VMTRKSVDDP  540
GRPPGIVLSA ATSFWLPVPP KRVFDFLRDE NTRNEWDILS NGGVVQEMAH IANGRDTGNC  600
VSLLRVNSAN SSQSNMLILQ ESCTDQTASF VIYAPVDIVA MNVVLNGGDP DYVALLPSGF  660
AVLPDGTAAH GGGMEESAGG SLLTVAFQIL VDSVPTAKLS LGSVATVNNL IACTVERIKA  720
SLSCESA*
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.1440s0010.10.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011005112.10.0PREDICTED: homeobox-leucine zipper protein HDG2 isoform X1
SwissprotQ94C370.0HDG2_ARATH; Homeobox-leucine zipper protein HDG2
TrEMBLA0A2K1XW690.0A0A2K1XW69_POPTR; Uncharacterized protein
STRINGPOPTR_0014s15010.10.0(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05230.40.0homeodomain GLABROUS 2