PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.1429s0020.3.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family bZIP
Protein Properties Length: 376aa    MW: 41956.2 Da    PI: 6.3574
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.1429s0020.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_139.31.4e-1288132246
                             XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                             +++k++rr+++NReAAr+sR+RKka++++Le    +L    ++L 
  SapurV1A.1429s0020.3.p  88 PSDKVQRRLAQNREAARKSRLRKKAYVQQLESSRTKLIHLEQELN 132
                             689****************************98888877766665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.2E-884132No hitNo description
SMARTSM003384.5E-687147IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.95689131IPR004827Basic-leucine zipper domain
PfamPF001704.5E-989130IPR004827Basic-leucine zipper domain
CDDcd147088.37E-2191143No hitNo description
SuperFamilySSF579592.09E-791132No hitNo description
PROSITE patternPS00036094109IPR004827Basic-leucine zipper domain
PfamPF141449.2E-28177252IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    Send to blast
MNSTSTQFVT SGRMGIYDPM HQIGMWGENF KSNGNTSTST MFIAGNPNPN PSASIIIESD  60
TKLDNQSEDT SQGTLGPSNN YDQEASKPSD KVQRRLAQNR EAARKSRLRK KAYVQQLESS  120
RTKLIHLEQE LNSARQQGLY VGGGVDTSQL GFGGATNSGI PTFEMEYGHW LEEQNRHIRD  180
MRIALNAHIS DAELHILVDS DINHYSELFG MKATAAKADV FYVMSGLWKS SAERFLLWIG  240
GFRPSELLKI LLPHIEPLTE QQVVDALNLR QSCQQAEDAL TQGMEKLQQT LAETVAAGQL  300
GDASYPPHKE TAMEKLEDLV RFVQQADHLR QETLQQMSRI LTIRQAARGL LALGEYFQRL  360
RALSSFWAIR PCEPA*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00642SELEXTransfer from LOC107771743Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.1429s0020.3.p
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF1951190.0EF195119.1 Populus tremula x Populus alba TGA transcription factor 1 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024457310.10.0transcription factor TGA1 isoform X2
SwissprotQ392371e-180TGA1_ARATH; Transcription factor TGA1
TrEMBLA0A2K2ADF10.0A0A2K2ADF1_POPTR; Uncharacterized protein
STRINGPOPTR_0005s08370.10.0(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65210.50.0bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Herrera-Vásquez A, et al.
    Transcriptional Control of Glutaredoxin GRXC9 Expression by a Salicylic Acid-Dependent and NPR1-Independent Pathway in Arabidopsis.
    Plant Mol. Biol. Rep., 2018.
    [PMID:26696694]
  4. Gutsche N,Zachgo S
    The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding.
    PLoS ONE, 2016. 11(4): p. e0153810
    [PMID:27128442]
  5. Sun T, et al.
    TGACG-BINDING FACTOR 1 (TGA1) and TGA4 regulate salicylic acid and pipecolic acid biosynthesis by modulating the expression of SYSTEMIC ACQUIRED RESISTANCE DEFICIENT 1 (SARD1) and CALMODULIN-BINDING PROTEIN 60g (CBP60g).
    New Phytol., 2018. 217(1): p. 344-354
    [PMID:28898429]