PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.1388s0020.3.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family NAC
Protein Properties Length: 298aa    MW: 33370.8 Da    PI: 4.7834
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.1388s0020.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM65.51.5e-20129851128
                     NAM  51 vkaeekewyfFskrdkkyatgkrknra........tksgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyr 127
                             +k++ ++++fF++++++y+tg+rk+r+         +s +W++tg++k+v++ +g ++g+kk++v+y  +++ +k+ k++Wvmh+y+
  SapurV1A.1388s0020.3.p  12 AKKDGNSVHFFHRTNNAYSTGQRKRRKihcevgsdEESVRWHKTGRTKSVID-NGVQKGCKKIMVLYksSKKGSKPDKSKWVMHQYH 97 
                             45566799******************86777776666999************.999***********4434666778*********9 PP

                     NAM 128 l 128
                             l
  SapurV1A.1388s0020.3.p  98 L 98 
                             8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100521.4331117IPR003441NAC domain
SuperFamilySSF1019414.71E-2313117IPR003441NAC domain
PfamPF023652.6E-71998IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    Send to blast
MNAITYSSMA SAKKDGNSVH FFHRTNNAYS TGQRKRRKIH CEVGSDEESV RWHKTGRTKS  60
VIDNGVQKGC KKIMVLYKSS KKGSKPDKSK WVMHQYHLGT DEDEKEGEFV VSKIFYQQKG  120
TERNDDNVLI EDNDILSHQT SPRTPNPNPP RPAKSVMYND AIADDNMMQL PVQNNDIKEE  180
APDVPAHVFQ LEGDVEFPEW FAGESQAVEN SDFDGLDDSL LCNEIFDSAP RVPNNSGAKR  240
VSCTGMAHNT NEENENSNEP CGIAELENLD LDTPPDFHLA DLQLGSQESI LGWLDRL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.1388s0020.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011003122.11e-169PREDICTED: NAC domain-containing protein 8 isoform X2
TrEMBLA0A2K2C8451e-167A0A2K2C845_POPTR; Uncharacterized protein
STRINGPOPTR_0001s35490.11e-138(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.16e-38NAC family protein