PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.1334s0070.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family WRKY
Protein Properties Length: 619aa    MW: 66213 Da    PI: 6.9273
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.1334s0070.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.53.7e-30261320159
                             ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                    WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                             ++Dg++WrKYGqK  kg+++pr+YYrCt a +Cpv+k+v+r+aed +++++tYeg+Hnh+
  SapurV1A.1334s0070.1.p 261 MNDGCQWRKYGQKIAKGNPCPRAYYRCTAApSCPVRKQVQRCAEDMTILTTTYEGTHNHP 320
                             58***************************99****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.7E-31246322IPR003657WRKY domain
SuperFamilySSF1182901.01E-26254322IPR003657WRKY domain
PROSITE profilePS5081127.875256322IPR003657WRKY domain
SMARTSM007741.9E-35261321IPR003657WRKY domain
PfamPF031062.1E-26262320IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 619 aa     Download sequence    Send to blast
MTKMDAIRRA RHEVLLKEDE RADSSGDEGS CREEIATKVG SKRDDCRSSS PEQGDSGKQV  60
VVATEQERTS MEADAKESSS QKELDDQLES ARAEMGEARD ENQRLKIYLD RIVKDYRALQ  120
MKFYDITQQE ETKKSTDPVD DHQGTEHHEL VSLTLGRISS EPKRDGKSCK TSSQGENHDK  180
KSLSLGLDCT FEASKSDTNE GLPNLSSVNS FGEPKEEAGE AWQRSKALKT MRGGDDEVIM  240
QQNPAKKARV SVRARCDTPT MNDGCQWRKY GQKIAKGNPC PRAYYRCTAA PSCPVRKQVQ  300
RCAEDMTILT TTYEGTHNHP LPMSATAMAS TTSAAASMLL SGSSSSSGSG PSFNSGTIAV  360
DLHGQNYYLP DNSKSKQFYL SNSSLSSSSP YPTITLDLTS SPSGASSHFS RFTASNYRPD  420
IQKFAPTSLN FGSSESSNAM APPWGNGFLT TSGQSHSRNH PGTLNIGRPA MDQGNIYDQF  480
CMQKINDHLA AATSQQSQLP ADTIAAATKA ITADPSFQSA LAAALSSIIG TGAGGSANGA  540
ANLGGGNQLV PKWGPPVTNS FSSPPPPNGN PCASYFNKTT SSQPPASSKT IFVPLSLPFS  600
TPSNAASASP ADKNDRAN*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A9e-212613221777Probable WRKY transcription factor 4
2lex_A9e-212613221777Probable WRKY transcription factor 4
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.1334s0070.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024441832.10.0probable WRKY transcription factor 72
TrEMBLA0A2K1XJ020.0A0A2K1XJ02_POPTR; Uncharacterized protein
STRINGPOPTR_0015s07530.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65034134
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15130.12e-66WRKY DNA-binding protein 72