PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.1078s0130.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family bZIP
Protein Properties Length: 407aa    MW: 44811.6 Da    PI: 6.8027
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.1078s0130.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1301.1e-09214272563
                             CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                             kr++r   NR +A rs +RK  +i+eLe+k+++L++e ++L  +++ l     +l se+
  SapurV1A.1078s0130.1.p 214 KRAKRIWANRQSAARSKERKMRYIAELERKMQTLQTEATSLSAQMNLLHRDTNSLSSEN 272
                             9****************************************************999998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.1E-12210274IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.749212275IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.46E-10214265No hitNo description
Gene3DG3DSA:1.20.5.1702.9E-9214270No hitNo description
PfamPF001701.8E-8214272IPR004827Basic-leucine zipper domain
CDDcd147035.31E-23215264No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 407 aa     Download sequence    Send to blast
MDKDKSRSNH IGGLPPPSGR YSCFPPSGSS YNVKPDQSPP TFPPKAPGSS SDPSHFGHGS  60
DSNRFSHDIS RMPDNPPKNL GHRRAHSEIL TLPDDISFDS DLGVVGGGTD GTTFSDETEE  120
DYLSMYLDMD KFSSSSATSA FQVGESSVPP ATVDLGAGPR ERPKVRHQHS LSMDGSTTIK  180
PEMLMSGSEE ASHADCKKAI SAAKLAELAL LDPKRAKRIW ANRQSAARSK ERKMRYIAEL  240
ERKMQTLQTE ATSLSAQMNL LHRDTNSLSS ENSELKLRLQ TMEQQVHLQD ALNDALKEEI  300
QHLKVLTGQA LNGGPMMNYA SFGGGQQLYP NNQTMHTFLA AQQFQQLQIH SQKQQQQQFQ  360
LHQLQQQQLQ QQQQQGGDLQ MRGSMASSSQ KDSLSEDNSS SSKNRE*
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor with an activatory role.
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.1078s0130.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006372845.10.0probable transcription factor PosF21
SwissprotQ040881e-151POF21_ARATH; Probable transcription factor PosF21
TrEMBLU5FMQ70.0U5FMQ7_POPTR; Uncharacterized protein
STRINGPOPTR_0017s05610.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55173249
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06070.11e-139bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Xu C, et al.
    Control of auxin-induced callus formation by bZIP59-LBD complex in Arabidopsis regeneration.
    Nat Plants, 2018. 4(2): p. 108-115
    [PMID:29358751]