PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.1040s0080.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | BES1 | ||||||||
Protein Properties | Length: 330aa MW: 35417.5 Da PI: 8.4157 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 209 | 1.3e-64 | 2 | 145 | 1 | 150 |
DUF822 1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssas 87 ++++r pt kErEnnkrRERrRRaiaaki++GLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGtt+rkg+kp e +++ g sa+ SapurV1A.1040s0080.2.p 2 TSGTRLPTYKERENNKRRERRRRAIAAKIFSGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTFRKGCKPVECMDILGVSAT 88 5899*********************************************************************************** PP DUF822 88 aspesslqsslkssalaspvesysaspksssfpspssldsislasa..asllpvlsvlslvsssl 150 +sp+ss++ +sp++sy++sp sssfpsp+s++ + +a+ +sl+p+l++ls++sss+ SapurV1A.1040s0080.2.p 89 TSPCSSYH--------HSPCASYNPSPGSSSFPSPASSSYAANANMdrNSLIPWLKNLSSASSSA 145 ********........9*****************98877665554455**********9987765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 3.1E-64 | 4 | 139 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Sequence ? help Back to Top |
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Protein Sequence Length: 330 aa Download sequence Send to blast |
MTSGTRLPTY KERENNKRRE RRRRAIAAKI FSGLRMYGNY KLPKHCDNNE VLKALCNEAG 60 WTVEPDGTTF RKGCKPVECM DILGVSATTS PCSSYHHSPC ASYNPSPGSS SFPSPASSSY 120 AANANMDRNS LIPWLKNLSS ASSSASSSKL PHLHIHGGSI SAPVTPPLSS PTARTPRIKA 180 DWEDQSIRPG WGGQQHYFLP SSTPTSPGRQ IVPDPEWFRG IQIPQGCPTS PTFSLVASNP 240 FGFKEGAFAG GGSNGGSRMW TPGQSGTCSP AIAAGSDHTA DIPMAEVISD EFAFRCNATG 300 LVKPWEGERI HEECGSDDLE LTLGNSRTR* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5zd4_A | 2e-21 | 25 | 77 | 391 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_B | 2e-21 | 25 | 77 | 391 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_C | 2e-21 | 25 | 77 | 391 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
5zd4_D | 2e-21 | 25 | 77 | 391 | 443 | Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00248 | DAP | Transfer from AT1G78700 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.1040s0080.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EF145433 | 0.0 | EF145433.1 Populus trichocarpa clone WS01124_K11 unknown mRNA. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011002762.1 | 0.0 | PREDICTED: BES1/BZR1 homolog protein 4 isoform X1 | ||||
Refseq | XP_011002763.1 | 0.0 | PREDICTED: BES1/BZR1 homolog protein 4 isoform X2 | ||||
Swissprot | Q9ZV88 | 1e-137 | BEH4_ARATH; BES1/BZR1 homolog protein 4 | ||||
TrEMBL | A9PB38 | 0.0 | A9PB38_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0001s39520.1 | 0.0 | (Populus trichocarpa) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G78700.1 | 1e-117 | BES1/BZR1 homolog 4 |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.1040s0080.2.p |