PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SapurV1A.0996s0010.1.p

Organism

Salix purpurea

Taxonomic ID

77065

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix

Family

bZIP

Protein Properties

Length: 384aa MW: 42475.7 Da PI: 6.0261

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SapurV1A.0996s0010.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	29	2.3e-09	244	296	3	55
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 e kr+rr+ NR +Ar +R+R++ +i eL+ ++++L e ++++ + +k+ SapurV1A.0996s0010.1.p 244 EAKRARRLVVNRNSARSYRRRRQSQITELQAEIDKLMDEHASMASDFARVQKK 296 68****************************************99988887765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	8.7E-5	242	306	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.186	244	296	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	2.6E-8	244	295	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.37E-6	246	296	No hit	No description
Gene3D	G3DSA:1.20.5.170	1.2E-6	246	296	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence Send to blast
MNGAGDELSA IFDSCTWPVS AMNKPAWATG KLAQSFSPAS SLHDHVMHVK TSHLNPDQPV 60 TINRNESDQL ALEKLAQELS ASTPSLLPPL TTLSLNEIVE ISHQRFDQNP LVSGMARRES 120 ELALEKLAEE LSTTATSVGP QMSLSSIVDQ ENILGIENPQ TLAPYIYSVL QAKLNMACAA 180 AAIRFGEPST HPKNQVQAKQ NLEPSPEYKI DVMQRKRKVE IRQTISDASS KEDSEAIEEI 240 DPVEAKRARR LVVNRNSARS YRRRRQSQIT ELQAEIDKLM DEHASMASDF ARVQKKHVDA 300 TVENEKLKDE IGALTARLSK VEERVEQLGK VNPMFILNFR THGRGVQHGG SQVNQASSNA 360 EFNMDPRSIQ QLQPDLENAP NST*

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence Send to blast

MNGAGDELSA IFDSCTWPVS AMNKPAWATG KLAQSFSPAS SLHDHVMHVK TSHLNPDQPV  60
TINRNESDQL ALEKLAQELS ASTPSLLPPL TTLSLNEIVE ISHQRFDQNP LVSGMARRES  120
ELALEKLAEE LSTTATSVGP QMSLSSIVDQ ENILGIENPQ TLAPYIYSVL QAKLNMACAA  180
AAIRFGEPST HPKNQVQAKQ NLEPSPEYKI DVMQRKRKVE IRQTISDASS KEDSEAIEEI  240
DPVEAKRARR LVVNRNSARS YRRRRQSQIT ELQAEIDKLM DEHASMASDF ARVQKKHVDA  300
TVENEKLKDE IGALTARLSK VEERVEQLGK VNPMFILNFR THGRGVQHGG SQVNQASSNA  360
EFNMDPRSIQ QLQPDLENAP NST*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	SapurV1A.0996s0010.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_006369114.1	0.0	light-inducible protein CPRF2
TrEMBL	B9N7G0	0.0	B9N7G0_POPTR; Uncharacterized protein
STRING	POPTR_0001s16580.1	0.0	(Populus trichocarpa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF28149	2	2

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.2	1e-11	bZIP family protein

Link Out ? help Back to Top
Phytozome	SapurV1A.0996s0010.1.p