PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0985s0010.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family WRKY
Protein Properties Length: 426aa    MW: 46165.4 Da    PI: 6.2871
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0985s0010.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY97.11.1e-30205263259
                             --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                    WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                             +D ++WrKYGqK++kgs++pr+YYrC+s+ gC ++k+vers++dp+++++ Y+g+H+h+
  SapurV1A.0985s0010.1.p 205 NDVWAWRKYGQKPIKGSPYPRNYYRCSSSkGCAARKQVERSNTDPNMFIVCYTGDHTHP 263
                             8**************************998****************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.7E-30194265IPR003657WRKY domain
PROSITE profilePS5081132.661199265IPR003657WRKY domain
SuperFamilySSF1182901.44E-26200265IPR003657WRKY domain
SMARTSM007743.0E-36204264IPR003657WRKY domain
PfamPF031067.2E-26205263IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 426 aa     Download sequence    Send to blast
MAEDQDWDLY AVVRSCTSAA AAATTNKNSS SSSENFESPF DQRLASLTFD GGGDEESSPF  60
SFPNLACQPR NNNCLQELRD SCKPFLPGFT TSAGRLQGKN TNNNIPIFSI SDSGVIFSGQ  120
NQAQLAQQQR PSPSTGVAIS PWFNSSHKQP PHVQEQQNQR RQLHQQGTST SSLFPLRTTQ  180
SQAPRKKKSN QKRLISHVTA EILANDVWAW RKYGQKPIKG SPYPRNYYRC SSSKGCAARK  240
QVERSNTDPN MFIVCYTGDH THPRPTQRNS LAGSTRNKVQ QPAQKLENKE SEQPILAHRG  300
LCSSPLSATT LSHRTTLSTP IYHIEEVGNE QESIKTHSLE GGQGSDDHED GVDGCDNDIN  360
DDSDDDLLIS NMALNEDLIK GFQELVSGNE DGGLSNSPAF GDNFSSPVIG GSASTAAGAT  420
GGGGW*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5w3x_B7e-20188266280Disease resistance protein RRS1
5w3x_D7e-20188266280Disease resistance protein RRS1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0985s0010.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002305271.20.0probable WRKY transcription factor 27
TrEMBLB9H3N00.0B9H3N0_POPTR; Uncharacterized protein
STRINGPOPTR_0004s07050.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF67943249
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.12e-51WRKY DNA-binding protein 27