PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0981s0080.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family C2H2
Protein Properties Length: 293aa    MW: 32194.5 Da    PI: 8.246
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0981s0080.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H217.21.4e-05226248223
                             EETTTTEEESSHHHHHHHHHH.T CS
                 zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                             +Cp Cg++Fs+  nL+ H ++ H
  SapurV1A.0981s0080.1.p 226 ECPQCGTRFSSVTNLVEHVQKvH 248
                             5******************9988 PP
2zf-C2H216.62.2e-05264286223
                             EETTTTEEESSHHHHHHHHHH.T CS
                 zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                             +Cp+C+k F+++  L+ H  + H
  SapurV1A.0981s0080.1.p 264 VCPKCSKGFRDPVALVEHVERdH 286
                             6*****************99888 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1183104.32E-12452No hitNo description
PROSITE profilePS510398.1611056IPR000058Zinc finger, AN1-type
Gene3DG3DSA:4.10.1110.102.9E-111049IPR000058Zinc finger, AN1-type
PfamPF014282.2E-131351IPR000058Zinc finger, AN1-type
SMARTSM001541.1E-41352IPR000058Zinc finger, AN1-type
SuperFamilySSF1183101.06E-888142No hitNo description
Gene3DG3DSA:4.10.1110.102.6E-1191150IPR000058Zinc finger, AN1-type
PROSITE profilePS510397.95398151IPR000058Zinc finger, AN1-type
PfamPF014281.6E-8101141IPR000058Zinc finger, AN1-type
SMARTSM001540.049101142IPR000058Zinc finger, AN1-type
SuperFamilySSF576675.05E-5225282No hitNo description
PROSITE profilePS501579.889225248IPR007087Zinc finger, C2H2
SMARTSM003550.0037225248IPR015880Zinc finger, C2H2-like
Gene3DG3DSA:3.30.160.607.4E-4226249IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PfamPF138943.2E-4226248No hitNo description
PROSITE patternPS000280227248IPR007087Zinc finger, C2H2
PROSITE profilePS501579.078263291IPR007087Zinc finger, C2H2
SMARTSM003550.11263286IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280265286IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    Send to blast
MGTPQFPDLG KHCSVEDCKL IDFLPFTCDR CRQVFCLEHR SYIQHDCPKA DSNGVTVVIC  60
PLCAKGVRLV PDEDPNISWE VHVNTECDPS NYDKVTKKRK CPVRGCREVL TFSNTIKCRD  120
CTLDHCLKHR FGQDHNCPGP KKPDVSFPFM GLLNRSKKEE SKPNRATTVS SSKWATNFLS  180
AASTVRASAQ AGMTKLSNEI SQAWQTATSS ASPSSSNGSG GIGPEECPQC GTRFSSVTNL  240
VEHVQKVHEK GGNQSRVLQL PMEVCPKCSK GFRDPVALVE HVERDHRGTS KA*
Functional Description ? help Back to Top
Source Description
UniProtMay be involved in environmental stress response. {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00306DAPTransfer from AT2G41835Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0981s0080.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002308952.10.0zinc finger AN1 and C2H2 domain-containing stress-associated protein 11
SwissprotQ8VZ421e-123SAP11_ARATH; Zinc finger AN1 and C2H2 domain-containing stress-associated protein 11
TrEMBLB9H9V60.0B9H9V6_POPTR; Uncharacterized protein
STRINGPOPTR_0006s05070.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF58643351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41835.11e-124C2H2 family protein