PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | SapurV1A.0977s0060.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 255aa MW: 28449 Da PI: 9.3887 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 42.1 | 1.9e-13 | 199 | 245 | 5 | 51 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 +r +rk+kNRe+A rsR+RK+a+ eL kv Le+eN +Lkke ++ SapurV1A.0977s0060.3.p 199 RRLKRKIKNRESAARSRARKQAYHNELVSKVSRLEEENIKLKKEKKK 245 689***************************************99665 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.6E-7 | 195 | 252 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.622 | 197 | 242 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 5.1E-11 | 199 | 244 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 8.13E-10 | 199 | 245 | No hit | No description |
CDD | cd14707 | 1.22E-12 | 199 | 232 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.7E-12 | 199 | 246 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 202 | 217 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 255 aa Download sequence Send to blast |
MGVQTMASQS NGQQSHLQPY QLMRQTSWYN LTLNEVEKQL GNLGKPLYSM NLDELLKNVW 60 STEGDQSMGM DGESTTTSSL QRQASFTLAR TLSGKTVDQV WKEIQQGQKK RFGQEMNVQE 120 REQTLGETTL EDFLVQAGLF AEATISPSVD LITVAAVTPQ SFPQNMVLTS SPSTGTLSDS 180 TTSGQSRDAP NALEKSFERR LKRKIKNRES AARSRARKQA YHNELVSKVS RLEEENIKLK 240 KEKKKCSLFV AESC* |
Functional Description ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Description | |||||
UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | SapurV1A.0977s0060.3.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | |||
GenBank | AC184074 | 0.0 | AC184074.2 Populus trichocarpa clone Pop1-51H15, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_011006043.1 | 1e-157 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
Refseq | XP_011006044.1 | 1e-157 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
Swissprot | Q9LES3 | 2e-53 | AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
TrEMBL | B9GI21 | 1e-151 | B9GI21_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0001s22790.1 | 1e-152 | (Populus trichocarpa) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G56850.1 | 4e-45 | ABA-responsive element binding protein 3 |
Link Out ? help Back to Top | |
---|---|
Phytozome | SapurV1A.0977s0060.3.p |
Publications ? help Back to Top | |||
---|---|---|---|
|