PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SapurV1A.0977s0060.2.p

Organism

Salix purpurea

Taxonomic ID

77065

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix

Family

bZIP

Protein Properties

Length: 270aa MW: 30365.1 Da PI: 9.7264

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SapurV1A.0977s0060.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	39.4	1.3e-12	199	243	5	49
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 +r +rk+kNRe+A rsR+RK+a+ eL kv Le+eN +Lkke SapurV1A.0977s0060.2.p 199 RRLKRKIKNRESAARSRARKQAYHNELVSKVSRLEEENIKLKKEK 243 689***************************************985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	3.1E-11	194	242	No hit	No description
SMART	SM00338	4.0E-10	195	267	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.622	197	242	IPR004827	Basic-leucine zipper domain
CDD	cd14707	4.36E-14	199	236	No hit	No description
Pfam	PF00170	3.1E-11	199	244	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	4.88E-10	199	245	No hit	No description
PROSITE pattern	PS00036	0	202	217	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 270 aa Download sequence Send to blast
MGVQTMASQS NGQQSHLQPY QLMRQTSWYN LTLNEVEKQL GNLGKPLYSM NLDELLKNVW 60 STEGDQSMGM DGESTTTSSL QRQASFTLAR TLSGKTVDQV WKEIQQGQKK RFGQEMNVQE 120 REQTLGETTL EDFLVQAGLF AEATISPSVD LITVAAVTPQ SFPQNMVLTS SPSTGTLSDS 180 TTSGQSRDAP NALEKSFERR LKRKIKNRES AARSRARKQA YHNELVSKVS RLEEENIKLK 240 KEKEFEKKFP IEPSPEQKYQ LRRTSSASF*

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	SapurV1A.0977s0060.2.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AC184074	0.0	AC184074.2 Populus trichocarpa clone Pop1-51H15, complete sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011006043.1	1e-172	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
Refseq	XP_011006044.1	1e-172	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	4e-65	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	B9GI21	1e-166	B9GI21_POPTR; Uncharacterized protein
STRING	POPTR_0001s22790.1	1e-166	(Populus trichocarpa)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	5e-49	ABA-responsive element binding protein 3

Link Out ? help Back to Top
Phytozome	SapurV1A.0977s0060.2.p

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]