PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0919s0010.2.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family WRKY
Protein Properties Length: 362aa    MW: 39879.1 Da    PI: 9.7283
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0919s0010.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY95.44.1e-30289346359
                             -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                    WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                             D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ +d  ++++tYegeH h 
  SapurV1A.0919s0010.2.p 289 DDYSWRKYGQKPIKGSPHPRGYYKCSSVrGCPARKHVERALDDSMMLIVTYEGEHSHA 346
                             99************************988****************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF105333.4E-17240285IPR018872Zn-cluster domain
Gene3DG3DSA:2.20.25.802.6E-32275348IPR003657WRKY domain
PROSITE profilePS5081130.871282348IPR003657WRKY domain
SuperFamilySSF1182903.27E-26285348IPR003657WRKY domain
SMARTSM007743.4E-36287347IPR003657WRKY domain
PfamPF031065.2E-26289345IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 362 aa     Download sequence    Send to blast
MAVELMMGCS GDSFATKMQE NAVREAASAG IQSVEEVIKL LKQNQLEQQQ KQQYYQELSA  60
ASSSSNLGTE NIMAVTDTAV NNFKKVISLL GRTTRTGHAR FRRAPDTCPP QQQIQEPEPE  120
PQQQKQRVQE PVPYVRAINS QPTEQGSAFR VYQPTPIHRL PPLPHNQQQK TLLVTKNGLS  180
DRNEMATTIN FSNSPAISAP TSFLSSLTGE TDSFQRSMSS GFQFTQPSAG KPPLSSSSLK  240
RKCNSMDDAA LKCGSSSSRC HCSKKRKSRI KRVVRVPAIS SKMADIPPDD YSWRKYGQKP  300
IKGSPHPRGY YKCSSVRGCP ARKHVERALD DSMMLIVTYE GEHSHAHPVD EAPGALVLES  360
S*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A1e-21275348274WRKY transcription factor 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0919s0010.2.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By salicylic acid and strongly during leaf senescence. {ECO:0000269|PubMed:11449049, ECO:0000269|PubMed:11722756}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011017162.10.0PREDICTED: probable WRKY transcription factor 7 isoform X2
SwissprotQ9STX01e-119WRKY7_ARATH; Probable WRKY transcription factor 7
TrEMBLA0A3N7EKI60.0A0A3N7EKI6_POPTR; Uncharacterized protein
STRINGPOPTR_0002s12480.10.0(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24240.16e-88WRKY DNA-binding protein 7