PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0905s0020.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family bZIP
Protein Properties Length: 176aa    MW: 20485.6 Da    PI: 10.6573
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0905s0020.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_125.72.4e-0874109338
                             XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeL 38 
                             ++kr +r  +NR+ A+rsR+RK+ ++e+Le+ vk+ 
  SapurV1A.0905s0020.1.p  74 KSKRIKRTVSNRLYAQRSRLRKLLYVEKLERNVKAE 109
                             68*******************************975 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF001701.2E-674108IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.10.880.102.5E-575106IPR008917Transcription factor, Skn-1-like, DNA-binding domain
SuperFamilySSF579598.04E-876131No hitNo description
CDDcd147033.74E-1077125No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 176 aa     Download sequence    Send to blast
MLSRKRSYSA SFFDMGVNSR SRAPFLPRSA RDSFAFLKEP CFVKSGNEPC TVAEQQNVTQ  60
CRSRHSNALD SELKSKRIKR TVSNRLYAQR SRLRKLLYVE KLERNVKAEE ARVSWLSQQE  120
PVYQQYQMAL KIENNRMKEI LGGLEREKAM KQAEFQYLKK ELQALRGASM SLLFY*
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0905s0020.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2165442e-33AC216544.1 Populus trichocarpa clone POP016-D10, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLB9IGE56e-87B9IGE5_POPTR; Uncharacterized protein
STRINGPOPTR_0016s12930.11e-87(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2822033
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42380.21e-15bZIP family protein