PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0893s0030.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family bZIP
Protein Properties Length: 368aa    MW: 41459.9 Da    PI: 7.3661
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0893s0030.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_123.89.6e-082402861763
                             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1  17 ArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                             A+rsR RK+++i+eLe+ v++L+ae +    ele l+++   l +e+
  SapurV1A.0893s0030.1.p 240 AQRSRVRKLQYIAELERNVQALQAEGSGVSAELEFLNQQTLILSMEN 286
                             89**********************************99988777776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0033229288IPR004827Basic-leucine zipper domain
CDDcd147036.67E-15231278No hitNo description
SuperFamilySSF579592.56E-5240282No hitNo description
Gene3DG3DSA:1.20.5.1703.8E-5240282No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    Send to blast
MANSKGSANI RNLMYSGKHP LLPPKSPFPS ISPSFIDYVP SNSFGSKTVQ KPREGNTHHQ  60
RTSSETLFIE EQPSWLDDLL NEPETPVRRG HRRSSSDSFA YIDVANASNM DYAAQDEYMY  120
KNVISIPSRG SHDFDHHQDV RQASLYSEMN LAKQKNRAWD SSLNAPTFPS SISSVREIAG  180
LQSSGSSCAP READCVSESE KQDPLDGPYD QKISFEKKDS SNSKSSASDN DTKRAKQQFA  240
QRSRVRKLQY IAELERNVQA LQAEGSGVSA ELEFLNQQTL ILSMENKSLM QRLENLAQEQ  300
RIKYLEHEVL EREIGRLRAL YLQQQQPQHQ KPSSHRRSNS RDLDSLLENL SLNANSSRDP  360
LTGSLRI*
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0893s0030.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF1478880.0EF147888.1 Populus trichocarpa clone WS0125_L14 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011007869.10.0PREDICTED: uncharacterized protein At4g06598-like
SwissprotQ8W3M78e-69Y4598_ARATH; Uncharacterized protein At4g06598
TrEMBLA9PHN30.0A9PHN3_POPTR; Uncharacterized protein
STRINGPOPTR_0003s01040.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF51232637
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58110.24e-98bZIP family protein
Publications ? help Back to Top
  1. Kumekawa N,Hosouchi T,Tsuruoka H,Kotani H
    The size and sequence organization of the centromeric region of Arabidopsis thaliana chromosome 4.
    DNA Res., 2001. 8(6): p. 285-90
    [PMID:11853315]