PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0865s0170.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family bZIP
Protein Properties Length: 423aa    MW: 46502.3 Da    PI: 6.4601
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0865s0170.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.48.3e-10219277563
                             CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                             kr++r   NR +A rs +RK  +i+eLe+kv++L++e ++L  +l  l+     l++e+
  SapurV1A.0865s0170.1.p 219 KRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNVLTAEN 277
                             9********************************************99998887777766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.4E-15215279IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.921217280IPR004827Basic-leucine zipper domain
PfamPF001701.6E-8219273IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.06E-10219273No hitNo description
Gene3DG3DSA:1.20.5.1702.4E-10219273No hitNo description
CDDcd147032.04E-25220269No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 423 aa     Download sequence    Send to blast
MDKDKSTSHH SSGLPPPPGR YSSFSPSGSS FNLKPEQSPS TFPPMAPGSS SDPNHFGHGS  60
DSNRYSHDIS RMSDNPPKNL GHRRAHSEIL TLPDDISFDS DLGVVGGGAD GPTFSDETEE  120
DLLSMYLDMD KFNSSSATST FQVGESLAPA MAPLPATVNL GDGPSERPRV RHQHSQSMDG  180
STTIKPEMLM SGSEEASPAD SKKAVSAAKL AELALIDPKR AKRIWANRQS AARSKERKMR  240
YIAELERKVQ TLQTEATSLS AQLTLLQRDT NVLTAENSEL KLRLQTMEQQ VHLQDALNDA  300
LKEEIQHLKV LTGQMPNGGP MMNFASFGGG QQLYPNNQSM HTFLAAQQFQ QLQIHSQKQQ  360
QQQQQQQQQQ QFQLHQLQQH QLQQQQEQQQ QQQGGDLKMR GSLNSSSQKD NGSEANSSSS  420
KD*
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor with an activatory role.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00126DAPTransfer from AT1G06070Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0865s0170.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006372845.10.0probable transcription factor PosF21
SwissprotQ040881e-157POF21_ARATH; Probable transcription factor PosF21
TrEMBLU5FMQ70.0U5FMQ7_POPTR; Uncharacterized protein
STRINGPOPTR_0017s05610.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF55173249
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06070.11e-167bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Xu C, et al.
    Control of auxin-induced callus formation by bZIP59-LBD complex in Arabidopsis regeneration.
    Nat Plants, 2018. 4(2): p. 108-115
    [PMID:29358751]