PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0860s0020.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | bZIP | ||||||||
Protein Properties | Length: 449aa MW: 49332.7 Da PI: 7.5068 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 39.7 | 1.1e-12 | 276 | 330 | 3 | 57 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 + kr rr+q+NRe+ArrsR+RK+a++ e e+ v +L e+++L ++ +++++ SapurV1A.0860s0020.1.p 276 DAKRVRRMQSNRESARRSRRRKQAQLNERETQVGQLRDERSSLLSRFTDVNQKCD 330 579*******************************************999999997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 6.8E-13 | 274 | 338 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.9E-9 | 276 | 330 | No hit | No description |
PROSITE profile | PS50217 | 10.53 | 276 | 328 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 1.6E-9 | 277 | 330 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 6.19E-8 | 278 | 327 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 281 | 296 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF12498 | 1.7E-28 | 345 | 446 | IPR020983 | Basic leucine-zipper, C-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:2000693 | Biological Process | positive regulation of seed maturation | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 449 aa Download sequence Send to blast |
MISWLILVGI NEPLRLSKID NKFTRTKKSR ERISTEGRKE QTMNRVFSVD DFSDTFWPSP 60 PPSPPSTAPP MNRSESEWAL ERFLQEVSAA PVSSSAGNTN TAAPSARSQS STSSIPPENG 120 EDEVVEITKH PIHHRHHLKN PNPHPQPLDR NLTNPIDSEE YRAFLKSKLD LACTAVAMSR 180 ESNVIKPEDL SSSLEDQKLA DGNVSLGSQA FRTGHGISMA QIGADGGSLG IPAFPITQKK 240 QEAQTRQTTS GSSGEDSDDD DLEGDTGTNE NRGPTDAKRV RRMQSNRESA RRSRRRKQAQ 300 LNERETQVGQ LRDERSSLLS RFTDVNQKCD ASAIDNRILK ADIETLRAKV KMVEEQVKRV 360 TGLNPVLLAG SNMRSPGMPF VGGHVDASTN VDVPMQPNPH QFFHHPIHGI TPAPPHLQRL 420 NNNSFPNNNL VPHATNPQTD NGTINNGG* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 290 | 297 | RRSRRRKQ |
2 | 292 | 297 | SRRRKQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.0860s0020.1.p |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EF147042 | 0.0 | EF147042.1 Populus trichocarpa clone WS01226_K01 unknown mRNA. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011042439.1 | 0.0 | PREDICTED: light-inducible protein CPRF2 | ||||
TrEMBL | A9PFC5 | 0.0 | A9PFC5_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0005s23900.1 | 0.0 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF13691 | 18 | 25 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G54620.1 | 1e-54 | basic leucine zipper 25 |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0860s0020.1.p |