PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0840s0030.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family NZZ/SPL
Protein Properties Length: 316aa    MW: 34530.8 Da    PI: 9.6964
Description NZZ/SPL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0840s0030.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NOZZLE26.31.3e-083019336160
                  NOZZLE  36 rtetkksrgrkpgsktaqqkqkkptlrgmgvaklerfiieeekkkl.vvatvgdtssvaai........snt.........atrlpv 104
                              t t  +r rkp +    q +kk   rgmgva+le  +i+e  k +  +  +g      a         +n+         +  + v
  SapurV1A.0840s0030.1.p  30 PTRTTTTRTRKPTTTNKCQTRKKQPRRGMGVAQLENLRIQERWKAItETNQIGSLNLQPAQqmhvfdpfNNNenqmvqygtTVNYGV 116
                             4678889******9999999999999***************9998844445554432211101111111222111111111223445 PP

                  NOZZLE 105 pv.drgvvlqgfps............slgs..srilcggvgsgqvmidpvi...spwgfvetsa.....tthelssisn 160
                             p+  +gvv++gf                    +  + gg gsgqv+++p +   sp     + a     +++elssi++
  SapurV1A.0840s0030.1.p 117 PMrSNGVVFNGFLGwdhqdgvavkrvD--EfnANNYNGGFGSGQVLVNPYMvgsSPVHQAGAPAaavreASKELSSIPK 193
                             542467888888779998887766442..14366799***********9762223432222211111113467777764 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF087442.7E-633192IPR014855Plant transcription factor NOZZLE
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MATSLSLFLM PSDDKKQEPT MAISTKPAEP TRTTTTRTRK PTTTNKCQTR KKQPRRGMGV  60
AQLENLRIQE RWKAITETNQ IGSLNLQPAQ QMHVFDPFNN NENQMVQYGT TVNYGVPMRS  120
NGVVFNGFLG WDHQDGVAVK RVDEFNANNY NGGFGSGQVL VNPYMVGSSP VHQAGAPAAA  180
VREASKELSS IPKVMQKQKQ YDPTCLKMGG FSARAARSTA PYANHNHNNN EGVEAMAVPR  240
KGNNAMGRKV IMEYEFFPGK NGKNTCFKDM ESPTAEASVA VGTGEASCVT TYSDYSSYRA  300
SDASNSIDLS LKLSF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0840s0030.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2164491e-116AC216449.1 Populus trichocarpa clone POP006-O09, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_006370360.21e-174uncharacterized protein LOC18095670
TrEMBLA0A2K2CBX41e-172A0A2K2CBX4_POPTR; Uncharacterized protein
STRINGPOPTR_0001s41950.11e-172(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF83651723