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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
SapurV1A.0823s0110.1.p |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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| Family |
GRAS |
| Protein Properties |
Length: 547aa MW: 61395.2 Da PI: 5.3319 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| SapurV1A.0823s0110.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 414.3 | 1.1e-126 | 176 | 546 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsev 87
l+++Ll+cA+avs+ d ++a l+ l +++s +g+p+qRl ay++e+L+arl s+s++y+al++ + ss+ ++++ +++++
SapurV1A.0823s0110.1.p 176 LKQVLLACADAVSNADIQRAAGLMHVLDQMVSVSGEPIQRLGAYMLEGLRARLELSGSKIYRALKCDAPI---SSDLMTYMGILYQI 259
5799*****************************************************************9...9999999******* PP
GRAS 88 sPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeel 172
+P+ kf++ aN I eave e r+HiiDf+i qG QW+ L+q La+Rp gpp +RiTgv++++s + l +g+rL+k+Ae +
SapurV1A.0823s0110.1.p 260 CPYWKFAYTSANVVIQEAVEYEPRIHIIDFQIAQGSQWIVLMQMLACRPCGPPVIRITGVDDSQSAhaRGGGLDIVGQRLSKVAELC 346
**************************************************************9988889999*************** PP
GRAS 173 gvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerfle 259
+vpfef+ va + +++le+Lrv+pgEa++Vn+ + lh+++desv++ ++rd+++++vkslsP++v+++eqe+++n+++F+ rf+e
SapurV1A.0823s0110.1.p 347 NVPFEFHD-VAMDGCEVQLEHLRVQPGEAVVVNFPYVLHHMPDESVNTWNHRDRLIRMVKSLSPRIVTLIEQESNTNTKPFFPRFIE 432
********.6888999*********************************************************************** PP
GRAS 260 aleyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvks 346
+l+yy+a+f+s++++lp+++++ri+ E+++++r+ivn++ace+aer+erhe l+kWr+r+++aGF+++pls+++++ ++ +l++++
SapurV1A.0823s0110.1.p 433 TLDYYTAMFESIDVGLPKDDKQRINAEQHCVARDIVNMIACEEAERVERHELLAKWRSRFTMAGFNQYPLSSSVTTAVRDMLKEYD- 518
**************************************************************************************. PP
GRAS 347 dgyrveeesgslvlgWkdrpLvsvSaWr 374
+ y+v+e++ +l+l W++r + + SaWr
SapurV1A.0823s0110.1.p 519 RNYNVQERDSALYLRWRHRDMATSSAWR 546
55*************************8 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 547 aa
Download sequence Send
to blast |
MQTSQKHRSA GIHGFYHKPV QEIDQYGLSH VQILENNMYS DGGSQGAAIS FQTEQGEFFT 60
LESSSANAGF ANYDSPAASV SSNRSPFSPQ GSHSCISDPH HSPDTIYGSP FSGSSSAEED 120
NILRQKLREL EISLLGPESD ITDSGSFCFV SGGYQAESSA SWDWNLMMEM IPRLDLKQVL 180
LACADAVSNA DIQRAAGLMH VLDQMVSVSG EPIQRLGAYM LEGLRARLEL SGSKIYRALK 240
CDAPISSDLM TYMGILYQIC PYWKFAYTSA NVVIQEAVEY EPRIHIIDFQ IAQGSQWIVL 300
MQMLACRPCG PPVIRITGVD DSQSAHARGG GLDIVGQRLS KVAELCNVPF EFHDVAMDGC 360
EVQLEHLRVQ PGEAVVVNFP YVLHHMPDES VNTWNHRDRL IRMVKSLSPR IVTLIEQESN 420
TNTKPFFPRF IETLDYYTAM FESIDVGLPK DDKQRINAEQ HCVARDIVNM IACEEAERVE 480
RHELLAKWRS RFTMAGFNQY PLSSSVTTAV RDMLKEYDRN YNVQERDSAL YLRWRHRDMA 540
TSSAWR*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that acts as a positive regulator of continuous red light signals downstream of phytochrome B (phyB). Required for the regulation of hypocotyl elongation during de-etiolation. May be required to modulate phytochrome A (phyA) signal transduction in a phyB-independent way. {ECO:0000269|PubMed:16680434}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By osmotic and cold stresses, and UV-A/B. {ECO:0000269|PubMed:16680434}. |
