PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0767s0130.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family ERF
Protein Properties Length: 216aa    MW: 22295.7 Da    PI: 4.4975
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0767s0130.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.72.1e-1652100355
                     AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                             ++GVr ++ rg+Wv+eIr+p+    +  r++lg+f t+e+Aa a++ a+++l+g
  SapurV1A.0767s0130.1.p  52 FRGVRSRS-RGKWVSEIREPR----KpNRIWLGTFPTPEMAAVAYDVAALALKG 100
                             89***777.8*********94....478***********************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003806.2E-3251114IPR001471AP2/ERF domain
PROSITE profilePS5103221.87851108IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.2E-2951110IPR001471AP2/ERF domain
PfamPF008477.1E-952100IPR001471AP2/ERF domain
PRINTSPR003674.2E-105263IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-1952110IPR016177DNA-binding domain
CDDcd000181.20E-2952110No hitNo description
PRINTSPR003674.2E-1090110IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    Send to blast
MLNDQQSNTS SAGSSSSSSS GSSRTASAAA AAAAAAAAGA IAPKVSGHHH AFRGVRSRSR  60
GKWVSEIREP RKPNRIWLGT FPTPEMAAVA YDVAALALKG QDAELNFPDS AASLPVPAST  120
SPRDIQAAAA SAAAAIGAAR DALGIPSMGD TNQMEQEIRP MVDDQFVDED LMFDMPNVLV  180
NMAEGMLLSP PRLDIAGDDA TADDSTGDQN LWKFP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A9e-1545108872Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0767s0130.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF1559370.0EF155937.1 Populus trichocarpa TINY-like protein (TINYL18) gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002307914.11e-105ethylene-responsive transcription factor ERF024
RefseqXP_011004457.11e-105PREDICTED: ethylene-responsive transcription factor ERF024-like
SwissprotQ9SJR02e-51ERF24_ARATH; Ethylene-responsive transcription factor ERF024
TrEMBLB9HD631e-104B9HD63_POPTR; Uncharacterized protein
STRINGPOPTR_0006s02180.11e-105(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56232144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G36450.19e-39ERF family protein