PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SapurV1A.0753s0070.1.p

Organism

Salix purpurea

Taxonomic ID

77065

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix

Family

Dof

Protein Properties

Length: 492aa MW: 53733.2 Da PI: 7.1068

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SapurV1A.0753s0070.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.1	4.6e-39	100	159	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k+++cprC+s +tkfCy+nny+++qPr+fCk+C+ryWt+GG++rnvP+G+grrknk+ SapurV1A.0753s0070.1.p 100 PDKIVPCPRCNSLDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGSMRNVPIGAGRRKNKHL 159 7899*****************************************************985 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
ProDom	PD007478	3.0E-30	92	157	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	1.7E-31	102	158	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	28.537	104	158	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	106	142	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 492 aa Download sequence Send to blast
MKGESKDPAF KLFGRMISVP DARFPAEPLA KGSCSEITRV ETKGPSEDNS EEPEMFSVSG 60 QGKEESQAAM RVNEAQVIAK PKEGPLETND TDQEKVLKKP DKIVPCPRCN SLDTKFCYFN 120 NYNVNQPRHF CKNCQRYWTA GGSMRNVPIG AGRRKNKHLA TQYRQILVSS DGMPISGMEN 180 SDSISHQLQS SVESASTLSP STENGMVLKF GHETPRYDSM ENVLNLGDQN RYVEISSVNR 240 QDNVEEPSSC GSSKTASTAW ANELRENIMQ KERVDLPASS NELNAPNSLP CYSVPSWVFP 300 WNPAWNNVSS MAASQYSTGQ ARVTNIPNQV QLCPTPMLTV PSICPPNIPL QFVPSSYWGC 360 MPAWAAGTRN VSLSGSNVCL SPSTATSTSC CSGNGSPTLG KHSRDSKFMD EEKAGRRILV 420 PKTLRIDDPS EASKSPLWAA LGLQKDPSSK GTIFKNFETK AECYGHVSDI THLLEANPAA 480 LSRSHTFLES G*

Sequence ? help Back to Top

Protein Sequence Length: 492 aa Download sequence Send to blast

MKGESKDPAF KLFGRMISVP DARFPAEPLA KGSCSEITRV ETKGPSEDNS EEPEMFSVSG  60
QGKEESQAAM RVNEAQVIAK PKEGPLETND TDQEKVLKKP DKIVPCPRCN SLDTKFCYFN  120
NYNVNQPRHF CKNCQRYWTA GGSMRNVPIG AGRRKNKHLA TQYRQILVSS DGMPISGMEN  180
SDSISHQLQS SVESASTLSP STENGMVLKF GHETPRYDSM ENVLNLGDQN RYVEISSVNR  240
QDNVEEPSSC GSSKTASTAW ANELRENIMQ KERVDLPASS NELNAPNSLP CYSVPSWVFP  300
WNPAWNNVSS MAASQYSTGQ ARVTNIPNQV QLCPTPMLTV PSICPPNIPL QFVPSSYWGC  360
MPAWAAGTRN VSLSGSNVCL SPSTATSTSC CSGNGSPTLG KHSRDSKFMD EEKAGRRILV  420
PKTLRIDDPS EASKSPLWAA LGLQKDPSSK GTIFKNFETK AECYGHVSDI THLLEANPAA  480
LSRSHTFLES G*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	SapurV1A.0753s0070.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011047035.1	0.0	PREDICTED: cyclic dof factor 3-like
Refseq	XP_011047036.1	0.0	PREDICTED: cyclic dof factor 3-like
TrEMBL	A0A2K1Y217	0.0	A0A2K1Y217_POPTR; Uncharacterized protein
STRING	POPTR_0013s06290.1	0.0	(Populus trichocarpa)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF3502	31	65

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.2	2e-56	cycling DOF factor 2

Link Out ? help Back to Top
Phytozome	SapurV1A.0753s0070.1.p