PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

SapurV1A.0729s0180.2.p

Organism

Salix purpurea

Taxonomic ID

77065

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix

Family

bZIP

Protein Properties

Length: 340aa MW: 37198 Da PI: 7.0075

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
SapurV1A.0729s0180.2.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	51.2	2.6e-16	237	292	4	59
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 kr rr+ +NRe+ArrsR+RK+a + eLe+ v++L eN++L k+l +++++++ SapurV1A.0729s0180.2.p 237 AKRVRRMLSNRESARRSRRRKQAHLTELETQVAQLRVENSSLLKRLADISQKYSES 292 79********************************************9999998765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.0E-19	234	298	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	2.4E-12	236	289	No hit	No description
PROSITE profile	PS50217	11.691	236	291	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	6.8E-14	237	290	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.2E-11	238	288	No hit	No description
PROSITE pattern	PS00036	0	241	256	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 340 aa Download sequence Send to blast
MDRVFSMEDN VTQTNSGVQH RHEHQLSKMN RSESEWAFQR FLQEASAATF DDTTPSNSSA 60 DKTDVVHIND NGYSNNNATS KSCDNNYKGN AMSLSNGGCA TAASSSFGAP ADIPVESEDY 120 HAILKSKLNM ACAAVALSRA YFVKPLNSPA TAESGSQASS ASHLGSHTPS KGAWHDLSRS 180 RDKDASEPLE TPSLPSMQKK LAAAGKLTTS GTSRELSEDD ENEAETEITE NMHPGDAKRV 240 RRMLSNRESA RRSRRRKQAH LTELETQVAQ LRVENSSLLK RLADISQKYS ESAVDNRVLK 300 ADIETLRAKV TLTVLSLKVH THTQSLQGYH LPFLAENYI*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	250	257	RRSRRRKQ
2	252	257	SRRRKQ

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	SapurV1A.0729s0180.2.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	EF148294	0.0	EF148294.1 Populus trichocarpa x Populus deltoides clone WS01312_M14 unknown mRNA.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024458136.1	1e-180	light-inducible protein CPRF2
Swissprot	Q99090	2e-77	CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBL	A0A2K2ABZ1	1e-179	A0A2K2ABZ1_POPTR; Uncharacterized protein
STRING	POPTR_0005s05470.1	1e-148	(Populus trichocarpa)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.3	1e-53	bZIP family protein

Link Out ? help Back to Top
Phytozome	SapurV1A.0729s0180.2.p

Publications ? help Back to Top
Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness. EMBO J., 1991. 10(7): p. 1777-86 [PMID:2050115]