PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0729s0180.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family bZIP
Protein Properties Length: 445aa    MW: 48101.9 Da    PI: 6.3989
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0729s0180.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.74e-16237292459
                             XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                              kr rr+ +NRe+ArrsR+RK+a + eLe+ v++L  eN++L k+l  +++++++ 
  SapurV1A.0729s0180.1.p 237 AKRVRRMLSNRESARRSRRRKQAHLTELETQVAQLRVENSSLLKRLADISQKYSES 292
                             79********************************************9999998765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.0E-19234298IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.691236291IPR004827Basic-leucine zipper domain
PfamPF001709.9E-14237290IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.3E-12238290No hitNo description
SuperFamilySSF579591.76E-11238288No hitNo description
PROSITE patternPS000360241256IPR004827Basic-leucine zipper domain
PfamPF124987.8E-45305432IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 445 aa     Download sequence    Send to blast
MDRVFSMEDN VTQTNSGVQH RHEHQLSKMN RSESEWAFQR FLQEASAATF DDTTPSNSSA  60
DKTDVVHIND NGYSNNNATS KSCDNNYKGN AMSLSNGGCA TAASSSFGAP ADIPVESEDY  120
HAILKSKLNM ACAAVALSRA YFVKPLNSPA TAESGSQASS ASHLGSHTPS KGAWHDLSRS  180
RDKDASEPLE TPSLPSMQKK LAAAGKLTTS GTSRELSEDD ENEAETEITE NMHPGDAKRV  240
RRMLSNRESA RRSRRRKQAH LTELETQVAQ LRVENSSLLK RLADISQKYS ESAVDNRVLK  300
ADIETLRAKV RMAEETVKRF TGLNHMFHAM PDISTMSMPS FDGSPSDTSA DAAVPVEDDP  360
EHRFYQAPNN PISTHDSKPR VNIVSADISS VENMQPNPGA TTGVSGNKLG RTASLQRVAS  420
LESLQKQICG GASPCAPQSN GEQS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1250257RRSRRRKQ
2252257SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box-like motif (5'-ACGTGGC-3') of the chalcone synthase (CHS) gene promoter. G-box and G-box-like motifs are defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control.
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0729s0180.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF1482940.0EF148294.1 Populus trichocarpa x Populus deltoides clone WS01312_M14 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024458136.10.0light-inducible protein CPRF2
SwissprotQ990901e-117CPRF2_PETCR; Light-inducible protein CPRF2
TrEMBLA0A2K2ABZ10.0A0A2K2ABZ1_POPTR; Uncharacterized protein
STRINGPOPTR_0005s05470.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF41763358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.21e-71bZIP family protein
Publications ? help Back to Top
  1. Weisshaar B,Armstrong GA,Block A,da Costa e Silva O,Hahlbrock K
    Light-inducible and constitutively expressed DNA-binding proteins recognizing a plant promoter element with functional relevance in light responsiveness.
    EMBO J., 1991. 10(7): p. 1777-86
    [PMID:2050115]