PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0650s0140.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family G2-like
Protein Properties Length: 368aa    MW: 40364.1 Da    PI: 8.3992
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0650s0140.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like101.94.1e-3269122255
                 G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                             prlrWtp+LH +Fv+ave+LGG+++AtPk +l++m++kgL+++hvkSHLQ+YR+
  SapurV1A.0650s0140.1.p  69 PRLRWTPDLHLCFVHAVERLGGQDRATPKLVLQMMNIKGLSIAHVKSHLQMYRS 122
                             8****************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129411.70665125IPR017930Myb domain
Gene3DG3DSA:1.10.10.601.7E-3065124IPR009057Homeodomain-like
SuperFamilySSF466896.09E-1567124IPR009057Homeodomain-like
TIGRFAMsTIGR015571.3E-2269123IPR006447Myb domain, plants
PfamPF002491.7E-970121IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    Send to blast
MKGSDSLVEG SESSCSDKKV EQDEGDEEVD GASFKSKNEG ESTSNSSIEE NKTKAANGSF  60
RRYNRSKMPR LRWTPDLHLC FVHAVERLGG QDRATPKLVL QMMNIKGLSI AHVKSHLQMY  120
RSRRSDDPIQ GQGLFFEGGD SHICNLRQLA MLQNNFNQRS PCNLRYGDGS WRGHDHMMRG  180
AYIGGTALNR VKHGLYGSVT GCNSHNSLNY GSSVHIPSLN GKATGRTLQS LEGVKLFPVS  240
RQNESTASSM ESDFITKLQE RSGMLDQVEC LKASSSADKN WRSTIQEMQK GLKRKTLDRD  300
CNLDLNLSLK LAANGDGELE KSVEGCEVDG ALSLSLSSSS FSKLGRSMEG DGSRKHARMA  360
STLDLTL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A5e-1870124357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B5e-1870124357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C5e-1870124357Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D5e-1870124357Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0650s0140.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024462567.10.0uncharacterized protein LOC7472443
TrEMBLB9HHT80.0B9HHT8_POPTR; Uncharacterized protein
STRINGPOPTR_0008s07170.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF23783482
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40260.12e-49G2-like family protein