PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0625s0150.3.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family bZIP
Protein Properties Length: 283aa    MW: 30792.3 Da    PI: 4.9052
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0625s0150.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.41.8e-14227272348
                             XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 
                             + +r+rr++kNRe+A rsR+RK+a++ eLe  +  Le+eN++L ke
  SapurV1A.0625s0150.3.p 227 AQQRQRRMIKNRESAARSRERKQAYQVELESLAVRLEEENEQLLKE 272
                             679**************************************99886 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.7E-12223272No hitNo description
SMARTSM003381.3E-7225282IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.542227272IPR004827Basic-leucine zipper domain
PfamPF001707.4E-13227272IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.39E-9229272No hitNo description
CDDcd147076.12E-17229271No hitNo description
PROSITE patternPS000360232247IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    Send to blast
MASSKVMASS KPRNSGLSST TSSRSRRSIS SSLSATNTTE KRAHHSTDQL FQRESTMTVD  60
GILRNVYASP STESTLLGAQ ITLMETPNPP PPPQIETNDN DTQDMSDVIP QETRTADDIW  120
REIVAGRKEM KDEPDEMMTL EDFLAKAGAV DVVGEDGDDA KMSQSERLSG GLYAFDPVLP  180
SAFQVLDKVE GSIVGFGNGV EVAGSGGGGG RGKRGRNVVM EPLDKAAQQR QRRMIKNRES  240
AARSRERKQA YQVELESLAV RLEEENEQLL KEKVIQLALF SA*
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter. G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. {ECO:0000269|PubMed:8146148}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0625s0150.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024458002.11e-149G-box-binding factor 4 isoform X4
SwissprotP427771e-42GBF4_ARATH; G-box-binding factor 4
TrEMBLB9H7S81e-147B9H7S8_POPTR; Uncharacterized protein
STRINGPOPTR_0005s21500.11e-148(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.18e-37bZIP family protein