PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0625s0150.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family bZIP
Protein Properties Length: 310aa    MW: 34422.6 Da    PI: 7.6837
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0625s0150.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_144.53.4e-14227281357
                             XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                             + +r+rr++kNRe+A rsR+RK+a++ eLe  +  Le+eN++L ke ee +ke  
  SapurV1A.0625s0150.1.p 227 AQQRQRRMIKNRESAARSRERKQAYQVELESLAVRLEEENEQLLKEKEERTKERF 281
                             679***************************************9998877666654 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.4E-12223284No hitNo description
SMARTSM003385.1E-10225289IPR004827Basic-leucine zipper domain
PfamPF001701.3E-12227284IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.978227279IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.5E-9229280No hitNo description
CDDcd147073.34E-17229275No hitNo description
PROSITE patternPS000360232247IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    Send to blast
MASSKVMASS KPRNSGLSST TSSRSRRSIS SSLSATNTTE KRAHHSTDQL FQRESTMTVD  60
GILRNVYASP STESTLLGAQ ITLMETPNPP PPPQIETNDN DTQDMSDVIP QETRTADDIW  120
REIVAGRKEM KDEPDEMMTL EDFLAKAGAV DVVGEDGDDA KMSQSERLSG GLYAFDPVLP  180
SAFQVLDKVE GSIVGFGNGV EVAGSGGGGG RGKRGRNVVM EPLDKAAQQR QRRMIKNRES  240
AARSRERKQA YQVELESLAV RLEEENEQLL KEKEERTKER FKQLMEKVIP VVEKRRPRRV  300
LRRVNSLQW*
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter. G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. {ECO:0000269|PubMed:8146148}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0625s0150.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002307500.11e-167G-box-binding factor 4 isoform X2
SwissprotP427778e-57GBF4_ARATH; G-box-binding factor 4
TrEMBLB9H7S81e-165B9H7S8_POPTR; Uncharacterized protein
STRINGPOPTR_0005s21500.11e-166(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20283481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.12e-36bZIP family protein