PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0608s0130.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | bZIP | ||||||||
Protein Properties | Length: 197aa MW: 22424.1 Da PI: 9.9233 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 37.1 | 6.8e-12 | 86 | 132 | 5 | 51 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 ++ rr+++NRe+ArrsR RK++ +e+L++ v L +eN +L+++l + SapurV1A.0608s0130.1.p 86 RKRRRMISNRESARRSRMRKQKHTENLRNQVNWLRSENLELRNRLRS 132 5789**************************************87765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.8E-11 | 81 | 132 | No hit | No description |
SMART | SM00338 | 9.2E-13 | 82 | 146 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.036 | 84 | 147 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.86E-11 | 86 | 134 | No hit | No description |
Pfam | PF00170 | 7.1E-10 | 86 | 132 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 1.00E-17 | 87 | 138 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 89 | 104 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence Send to blast |
MLSTVSATNP LVEQMLDNPF QSFENGLTPW GCFDPFPCAP QSPKPVGSSS GSDVSNRSDQ 60 NTDNSNSNSN SGSDDPAPPV SVIDERKRRR MISNRESARR SRMRKQKHTE NLRNQVNWLR 120 SENLELRNRL RSVLYHLHSV RTENDWLRSE HSMLRKKLSE IRQILMTRQL HQLTSAWPCD 180 NIISATEQIP PSIITS* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 85 | 89 | RKRRR |
2 | 85 | 106 | RKRRRMISNRESARRSRMRKQK |
3 | 98 | 105 | RRSRMRKQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.0608s0130.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024461072.1 | 1e-106 | basic leucine zipper 43 | ||||
TrEMBL | A0A3N7G0T9 | 1e-104 | A0A3N7G0T9_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0007s14740.1 | 6e-83 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5435 | 32 | 54 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22850.2 | 3e-20 | basic leucine-zipper 6 |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0608s0130.1.p |