PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0586s0170.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | NAC | ||||||||
Protein Properties | Length: 202aa MW: 22750.3 Da PI: 5.6485 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 146.2 | 1.7e-45 | 12 | 140 | 2 | 127 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkat 86 p+Gf FhPtdeel++++Lk k+ g ++ +i+ev+++++ePw+Lp ++++++++ wyfFs+r+ ky++ k+++r+tk+gyWk t SapurV1A.0586s0170.1.p 12 PKGFGFHPTDEELINHFLKLKMIGGCDHEVAIIAEVNVCNSEPWELPglSEIQSNDTVWYFFSPRNYKYSNRKQASRTTKAGYWKVT 98 89*******************99988777699***************6449999999****************************** PP NAM 87 gkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127 g+d+ ++++ +ge++g kk+Lvfy+gr p+g++t+Wvmhey+ SapurV1A.0586s0170.1.p 99 GNDRIIMAAkTGEQIGKKKSLVFYNGRVPNGVRTNWVMHEYN 140 *******9878999***************************6 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 4.84E-52 | 3 | 158 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 50.69 | 11 | 159 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.9E-24 | 12 | 140 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence Send to blast |
MTSSAAPFPS APKGFGFHPT DEELINHFLK LKMIGGCDHE VAIIAEVNVC NSEPWELPGL 60 SEIQSNDTVW YFFSPRNYKY SNRKQASRTT KAGYWKVTGN DRIIMAAKTG EQIGKKKSLV 120 FYNGRVPNGV RTNWVMHEYN PTFNFHNQRD FVLCKLKRNS DDELTCEEGG SSSNVASDFP 180 NNVTEEDQLE AFLGVDEGYY N* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 5e-36 | 10 | 156 | 16 | 162 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 5e-36 | 10 | 156 | 16 | 162 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 5e-36 | 10 | 156 | 16 | 162 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 5e-36 | 10 | 156 | 16 | 162 | NO APICAL MERISTEM PROTEIN |
3swm_A | 5e-36 | 10 | 156 | 19 | 165 | NAC domain-containing protein 19 |
3swm_B | 5e-36 | 10 | 156 | 19 | 165 | NAC domain-containing protein 19 |
3swm_C | 5e-36 | 10 | 156 | 19 | 165 | NAC domain-containing protein 19 |
3swm_D | 5e-36 | 10 | 156 | 19 | 165 | NAC domain-containing protein 19 |
3swp_A | 5e-36 | 10 | 156 | 19 | 165 | NAC domain-containing protein 19 |
3swp_B | 5e-36 | 10 | 156 | 19 | 165 | NAC domain-containing protein 19 |
3swp_C | 5e-36 | 10 | 156 | 19 | 165 | NAC domain-containing protein 19 |
3swp_D | 5e-36 | 10 | 156 | 19 | 165 | NAC domain-containing protein 19 |
4dul_A | 5e-36 | 10 | 156 | 16 | 162 | NAC domain-containing protein 19 |
4dul_B | 5e-36 | 10 | 156 | 16 | 162 | NAC domain-containing protein 19 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP) (PubMed:18443413, PubMed:24329768). Calmodulin-regulated transcriptional repressor. Binds several synthetic promoters with randomly selected binding sites (PubMed:17947243). Functions synergistically with SNI1 as negative regulator of pathogen-induced PR1 expression and basal resistance to a virulent strain of P.syringae. Binds directly to the promoter of the PR1 gene (PubMed:22826500). Acts as positive regulator of innate immunity. Involved in the effector-triggered immunity (ETI) induction of immunity-related gene expression (PubMed:24329768). Mediates osmotic stress signaling in leaf senescence by up-regulating senescence-associated genes (PubMed:18443413). {ECO:0000269|PubMed:17947243, ECO:0000269|PubMed:18443413, ECO:0000269|PubMed:22826500, ECO:0000269|PubMed:24329768}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.0586s0170.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011035248.1 | 1e-136 | PREDICTED: NAC domain-containing protein 69-like isoform X2 | ||||
Refseq | XP_024440276.1 | 1e-136 | protein NTM1-like 9 isoform X2 | ||||
Swissprot | F4JN35 | 3e-49 | NTL9_ARATH; Protein NTM1-like 9 | ||||
TrEMBL | A0A2K1XRY4 | 1e-134 | A0A2K1XRY4_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0014s07210.1 | 1e-130 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2065 | 25 | 86 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35580.3 | 1e-51 | NAC transcription factor-like 9 |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0586s0170.1.p |
Publications ? help Back to Top | |||
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