PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.0574s0080.1.p
Organism
Salix purpurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family bZIP
Protein Properties Length: 486aa    MW: 53811.5 Da    PI: 6.3363
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.0574s0080.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.71.4e-09199240445
                             XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                  bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                              k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  SapurV1A.0574s0080.1.p 199 QKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLSQLEQEL 240
                             5888*************************9877777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.1E-7190243No hitNo description
SMARTSM003381.2E-8196259IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.427198242IPR004827Basic-leucine zipper domain
PfamPF001701.2E-6200240IPR004827Basic-leucine zipper domain
CDDcd147084.04E-22200252No hitNo description
SuperFamilySSF579598.75E-7200243No hitNo description
PROSITE patternPS000360203218IPR004827Basic-leucine zipper domain
PfamPF141449.5E-33282357IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 486 aa     Download sequence    Send to blast
MGSRTGAEDE KKAVVMPSFD PQLPISNSVC VEGSTIHPYR ATDFGVFLED DAIDLSPGTV  60
FISAKERTQA IPSDPLISGA FDKKHSSTSV NIKSPAVQVE SQRLPLEKVQ RLNQVFIPSV  120
CTENWGETQK LLLENIQQIS IPIVNTENWG ETNMADASPR TDISTDADTD DKNQRFDGGQ  180
STALMASDSS DRSKDKMDQK TLRRLAQNRE AARKSRLRKK AYVQQLESSR LKLSQLEQEL  240
QRARQQGIFV SSSGDQSHSM SGNGAMAFDV EYARWLEEQN RQINELRSAV NSHAGDAELR  300
IIIDGIMAHY DEVFKLKSNA AKADVFHLLS GMWKTPAERC FLWLGGFRSS ELLKLLVNQL  360
EPLTEQQLVG IGNLQQSSQQ AEDALSQGME ALQQSLSETL SSGTLGSSGS SGNVANYMGQ  420
MAMAMGKLGT LEGFIRQADN LRQQTLQQMH RILTTRQSAR ALLAIHDYFS RLRALSSLWL  480
ARPRE*
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Cis-element ? help Back to Top
SourceLink
PlantRegMapSapurV1A.0574s0080.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011000603.10.0PREDICTED: transcription factor TGA2-like isoform X1
RefseqXP_011000604.10.0PREDICTED: transcription factor TGA2-like isoform X1
RefseqXP_011000605.10.0PREDICTED: transcription factor TGA2-like isoform X1
RefseqXP_011000606.10.0PREDICTED: transcription factor TGA2-like isoform X1
RefseqXP_011000607.10.0PREDICTED: transcription factor TGA2-like isoform X1
SwissprotQ415580.0HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLA0A2K2B9N10.0A0A2K2B9N1_POPTR; Uncharacterized protein
STRINGPOPTR_0001s06700.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14703494
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-144TGACG motif-binding factor 6