PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0554s0190.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | bZIP | ||||||||
Protein Properties | Length: 242aa MW: 26891.8 Da PI: 4.2733 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 23.5 | 1.2e-07 | 143 | 185 | 4 | 46 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 +k+ rr +N+ AA rsR+RKk+ + Le k+ Le+e ++L SapurV1A.0554s0190.2.p 143 SKKRRRQLRNKDAAVRSRERKKMHVRDLEVKSRYLEGECRRLD 185 6999**********************************98775 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 2.6E-9 | 135 | 202 | No hit | No description |
SMART | SM00338 | 0.0039 | 139 | 204 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.622 | 142 | 199 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF07716 | 1.9E-6 | 143 | 184 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.63E-9 | 144 | 200 | No hit | No description |
CDD | cd14704 | 5.28E-18 | 145 | 196 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 147 | 162 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0030968 | Biological Process | endoplasmic reticulum unfolded protein response | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005789 | Cellular Component | endoplasmic reticulum membrane | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 242 aa Download sequence Send to blast |
MKFLQGDDVP GQIDWDNILD GLPFSDNIFE LEPPSTTYLQ PIDDSSNSLS PAEVSSWIGE 60 IETLLMKDDD DKVDQLDDCN AFLADILVDS PAAHESGGEV LDASTDKDST SSDDADGGPK 120 EKDDGAEEKT KNNEEEDPDD TVSKKRRRQL RNKDAAVRSR ERKKMHVRDL EVKSRYLEGE 180 CRRLDRLLQC FIAENHALRL CLQRGGATGV TSARQESAVL VMGMFHSPYC SLFSSLIVVF 240 F* |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00019 | PBM | Transfer from AT1G42990 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.0554s0190.2.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | CU227830 | 0.0 | CU227830.1 Populus EST from severe drought-stressed leaves. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024457643.1 | 1e-132 | bZIP transcription factor 60 isoform X2 | ||||
TrEMBL | B9H5X3 | 1e-128 | B9H5X3_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0005s27930.1 | 1e-129 | (Populus trichocarpa) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G42990.1 | 1e-23 | basic region/leucine zipper motif 60 |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0554s0190.2.p |