PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | SapurV1A.0500s0010.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
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Family | bZIP | ||||||||
Protein Properties | Length: 111aa MW: 13057 Da PI: 10.3327 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 27.8 | 5.5e-09 | 33 | 89 | 6 | 62 |
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 6 rerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 +e++kqk Re rr+Rq+Kk+ ++e e+k + +eN+ Lk +eel++e+ lkse SapurV1A.0500s0010.1.p 33 KEMKKQKKRETDRRYRQKKKKAVQETENKLAMAITENENLKRAVEELQQEIFHLKSE 89 89****************************************************997 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 5.5E-6 | 33 | 88 | No hit | No description |
PROSITE profile | PS50217 | 9.232 | 33 | 93 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.6E-5 | 45 | 88 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 111 aa Download sequence Send to blast |
PLISFLAFPT RSRATYRSRL MSAASAQTEL HTKEMKKQKK RETDRRYRQK KKKAVQETEN 60 KLAMAITENE NLKRAVEELQ QEIFHLKSER QLIEQGFETI YTELREEIGV * |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 38 | 52 | KKRETDRRYRQKKKK |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | SapurV1A.0500s0010.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002299106.1 | 3e-35 | uncharacterized protein LOC7457698 | ||||
TrEMBL | B9GLE6 | 8e-34 | B9GLE6_POPTR; Uncharacterized protein | ||||
STRING | POPTR_0001s04210.1 | 1e-34 | (Populus trichocarpa) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF17134 | 3 | 8 |
Link Out ? help Back to Top | |
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Phytozome | SapurV1A.0500s0010.1.p |